BLASTX nr result

ID: Coptis21_contig00016664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016664
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   320   6e-85
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   303   7e-80
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   301   2e-79
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   300   5e-79
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              300   5e-79

>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  320 bits (819), Expect = 6e-85
 Identities = 154/274 (56%), Positives = 205/274 (74%)
 Frame = -3

Query: 824 LSTLIRFSRPHTWTATVSGIISISLLPVETMADLSLNYFVEVVKAFLPALLMNIYLAALN 645
           L +  +FSRPHT   T+ GI S+SLLPVET+++LS  +F+ ++KA +P++LMNIY+  LN
Sbjct: 1   LHSFYQFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLN 60

Query: 644 QLYDVKSDKINKPYLPLPSGELSMNAGKAIAATCSILSFATGLWFYSPPPLSALVICFLL 465
           QL+DV+ DK+NKPYLPL SG+ SM  G AI +   + SFA G+ F SP   SAL+I  +L
Sbjct: 61  QLFDVEIDKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVL 120

Query: 464 GTVYSVDLPFLHWKNQPFLAAVCIVSVWALLYPFGFFIHMQKYVLGKPLVFTKSLKFGVA 285
           G+VYS++LPFL WK Q FLAA CI+ V A++    FF+HMQK+VLGK  V T+SL F  A
Sbjct: 121 GSVYSIELPFLRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLVFATA 180

Query: 284 FQFVFSSILALFKDIPDVEGDMKFGYQSVAAHLGQEKVFWFCINVLLTAYGTAVVIGAFS 105
           F   FS+++ALFKDIPDV+GD  +G QS +  LGQE+VFW C+N+LL AYG AVV+GA S
Sbjct: 181 FMCFFSAVIALFKDIPDVDGDRDYGIQSFSVSLGQERVFWLCVNMLLIAYGAAVVVGASS 240

Query: 104 PYTFNKIVIVLGHSLLAFMLWVRARSIDLTNKDS 3
            +  +K + +LGH  LAF+LW+RARS+DLT+KDS
Sbjct: 241 TFLPSKFITILGHCTLAFILWLRARSVDLTSKDS 274


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  303 bits (775), Expect = 7e-80
 Identities = 149/291 (51%), Positives = 207/291 (71%), Gaps = 2/291 (0%)
 Frame = -3

Query: 869 EDDHTSKTTSRLSQKLSTLIRFSRPHTWTATVSGIISISLLPVETMADLSLNYFVEVVKA 690
           +D  +S     + + L++L +FSRPHT   T+ GI S+SLLPVET+ DLS  YF+ ++KA
Sbjct: 98  DDICSSSKRGPILEHLNSLYQFSRPHTVIGTIIGITSVSLLPVETIVDLSPTYFIGLLKA 157

Query: 689 FLPALLMNIYLAALNQLYDVKSDKINKPYLPLPSGELSMNAGKAIAATCSILSFATGLWF 510
            +P++LMNIY+  LNQL+DV+ DK+NKPYLPL SG+ SM  G  I +   +LS   G+ F
Sbjct: 158 LVPSVLMNIYVVGLNQLFDVEIDKVNKPYLPLASGKFSMATGILIVSASLLLSLYMGITF 217

Query: 509 YSPPPLSALVICFLLGTVYSVDLPFLHWKNQPFLAAVCIVSVWALLYPFGFFIHMQKYVL 330
            SPP L+AL+I F LG+VYS++LPFL WK   FLAA CI+ V A++    FF+H+QK+VL
Sbjct: 218 QSPPLLAALLISFALGSVYSIELPFLRWKKHAFLAASCILIVRAMVVQLAFFVHIQKFVL 277

Query: 329 GKPLVFTKSLKFGVAFQFVFSSILALFKDIPDVEGDMKFGYQSVAAHLGQEKVFWFCINV 150
           GK +   +SL F  AF   FS+ +ALFKDIPDVEGD  +G QS +  LGQE+V W C+N+
Sbjct: 278 GKSIFIPRSLMFATAFMCFFSAAIALFKDIPDVEGDRDYGIQSFSVSLGQERVLWLCVNM 337

Query: 149 LLTAYGTAVVIGAFSPYTF--NKIVIVLGHSLLAFMLWVRARSIDLTNKDS 3
           LL AYG AVV GA SP +    K++ ++GHS +A++LW++A+ +DLT++ S
Sbjct: 338 LLVAYGAAVVHGASSPSSLLPVKLITMIGHSTIAWILWMKAQFVDLTSQKS 388


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  301 bits (771), Expect = 2e-79
 Identities = 167/365 (45%), Positives = 226/365 (61%), Gaps = 4/365 (1%)
 Frame = -3

Query: 1085 HQGQADLLIRSQGPVNHLYRGFYQHNHEKLSHCHLQSSYLSSKRE-GNKKSVLNHGTSL- 912
            +QG   LL   Q P  HL   F   N  K    H   + L++     + +S    G  L 
Sbjct: 19   NQGLITLL---QRPQRHLK--FSNGNTAKKLSVHSCVNILAATLSISSSRSKPTRGKKLP 73

Query: 911  GRCFCSIVEGDHTPE--DDHTSKTTSRLSQKLSTLIRFSRPHTWTATVSGIISISLLPVE 738
            G+  C  +E +   E  DD  +     L +K+    RFSRPHT   T+ GI S+SLLP+ 
Sbjct: 74   GQTLCGTLEHEFVIESKDDQLTLLQGDLWRKIDAFYRFSRPHTIIGTIIGITSVSLLPLT 133

Query: 737  TMADLSLNYFVEVVKAFLPALLMNIYLAALNQLYDVKSDKINKPYLPLPSGELSMNAGKA 558
            ++ DLS  +FV  +KA +P++ MNIY+  LNQL+DV+ DK+NKP LPL SGE SM  GKA
Sbjct: 134  SIGDLSPAFFVGYLKALIPSIFMNIYVVGLNQLFDVEIDKVNKPNLPLASGEYSMGLGKA 193

Query: 557  IAATCSILSFATGLWFYSPPPLSALVICFLLGTVYSVDLPFLHWKNQPFLAAVCIVSVWA 378
            I +   ++SFA G+ F SPP   AL+ICFL G+ YSV+LP L WK   FLAA  I+ V A
Sbjct: 194  IVSAFGLMSFAMGIVFQSPPVFFALLICFLFGSAYSVELPLLRWKRNAFLAAFSILMVRA 253

Query: 377  LLYPFGFFIHMQKYVLGKPLVFTKSLKFGVAFQFVFSSILALFKDIPDVEGDMKFGYQSV 198
            +     FF H+QKYVLG+P+VF +SL F      +F++++ALFKDIPDV+GD  FG QS 
Sbjct: 254  ITVNLAFFYHIQKYVLGRPMVFPRSLCFATVCISMFTTVIALFKDIPDVDGDRDFGIQSF 313

Query: 197  AAHLGQEKVFWFCINVLLTAYGTAVVIGAFSPYTFNKIVIVLGHSLLAFMLWVRARSIDL 18
            +  LGQ++VFW CI +LL AY +A+VIGA S +  +K+V V+GH  LA +LW RA S++L
Sbjct: 314  SVCLGQKRVFWLCIGILLIAYASALVIGASSSFLLSKLVTVIGHCTLASILWRRANSVNL 373

Query: 17   TNKDS 3
             +  S
Sbjct: 374  EDNSS 378


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  300 bits (768), Expect = 5e-79
 Identities = 150/290 (51%), Positives = 201/290 (69%)
 Frame = -3

Query: 872 PEDDHTSKTTSRLSQKLSTLIRFSRPHTWTATVSGIISISLLPVETMADLSLNYFVEVVK 693
           PED +       +S++L     FSRPHT   TV GI S+SLLP+ET++DLS  +FV ++K
Sbjct: 91  PEDQN------HVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLK 144

Query: 692 AFLPALLMNIYLAALNQLYDVKSDKINKPYLPLPSGELSMNAGKAIAATCSILSFATGLW 513
           A +P++LMNIY+  LNQ++DV+ DK+NKP LPL SG+ SM  G  I     ++S   G+ 
Sbjct: 145 AMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIM 204

Query: 512 FYSPPPLSALVICFLLGTVYSVDLPFLHWKNQPFLAAVCIVSVWALLYPFGFFIHMQKYV 333
           F SPP   AL+I FLLGT YS+++P L WK  P LAA CI+ V A++    FF H+QK+V
Sbjct: 205 FQSPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHV 264

Query: 332 LGKPLVFTKSLKFGVAFQFVFSSILALFKDIPDVEGDMKFGYQSVAAHLGQEKVFWFCIN 153
           LG+ +V+TKS+ FGVAF   FS+++ALFKDIPDV+GD +FG QS    LGQ+KVFW C+N
Sbjct: 265 LGRSIVYTKSVVFGVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKKVFWLCVN 324

Query: 152 VLLTAYGTAVVIGAFSPYTFNKIVIVLGHSLLAFMLWVRARSIDLTNKDS 3
           +LL AYG A VIGA S     K   V  H  LA +LWVRA+S+DL++K++
Sbjct: 325 MLLMAYGAATVIGASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEA 374


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  300 bits (768), Expect = 5e-79
 Identities = 150/290 (51%), Positives = 201/290 (69%)
 Frame = -3

Query: 872 PEDDHTSKTTSRLSQKLSTLIRFSRPHTWTATVSGIISISLLPVETMADLSLNYFVEVVK 693
           PED +       +S++L     FSRPHT   TV GI S+SLLP+ET++DLS  +FV ++K
Sbjct: 67  PEDQN------HVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLK 120

Query: 692 AFLPALLMNIYLAALNQLYDVKSDKINKPYLPLPSGELSMNAGKAIAATCSILSFATGLW 513
           A +P++LMNIY+  LNQ++DV+ DK+NKP LPL SG+ SM  G  I     ++S   G+ 
Sbjct: 121 AMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIM 180

Query: 512 FYSPPPLSALVICFLLGTVYSVDLPFLHWKNQPFLAAVCIVSVWALLYPFGFFIHMQKYV 333
           F SPP   AL+I FLLGT YS+++P L WK  P LAA CI+ V A++    FF H+QK+V
Sbjct: 181 FQSPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHV 240

Query: 332 LGKPLVFTKSLKFGVAFQFVFSSILALFKDIPDVEGDMKFGYQSVAAHLGQEKVFWFCIN 153
           LG+ +V+TKS+ FGVAF   FS+++ALFKDIPDV+GD +FG QS    LGQ+KVFW C+N
Sbjct: 241 LGRSIVYTKSVVFGVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKKVFWLCVN 300

Query: 152 VLLTAYGTAVVIGAFSPYTFNKIVIVLGHSLLAFMLWVRARSIDLTNKDS 3
           +LL AYG A VIGA S     K   V  H  LA +LWVRA+S+DL++K++
Sbjct: 301 MLLMAYGAATVIGASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEA 350


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