BLASTX nr result

ID: Coptis21_contig00016663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016663
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   278   8e-73
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   271   2e-70
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   270   2e-70
gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   266   3e-69
gb|AFB74212.1| homogentisate phytyltransferase [Brassica napus]       258   2e-66

>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  278 bits (712), Expect = 8e-73
 Identities = 133/245 (54%), Positives = 181/245 (73%)
 Frame = +3

Query: 6   YFVEVVKAVLPALLMNLYVVALNQLSDVESDKINKPHLPLPSGELSMNTGKAIAATCFIL 185
           +F+ ++KA++P++LMN+YVV LNQL DVE DK+NKP+LPL SG+ SM TG AI +   + 
Sbjct: 38  FFMGLLKALVPSVLMNIYVVGLNQLFDVEIDKVNKPYLPLASGDFSMGTGVAIVSASLLA 97

Query: 186 SFAAGLRFYSPPSLLALVIYCLLGTVYSVDLPFLHWKNQPFLAGASIASVWSLLFPFGFF 365
           SFA G+ F SP    AL+I C+LG+VYS++LPFL WK Q FLA   I  V +++    FF
Sbjct: 98  SFAMGIMFQSPLLFSALLISCVLGSVYSIELPFLRWKKQAFLAATCIMIVRAIVVQLAFF 157

Query: 366 IHMQKYVLGKPVVFTKSLKFLVAFQFVFSSMMALFKDIPDVEGDTKFGYKSFAAHLGQEK 545
           +HMQK+VLGK  V T+SL F  AF   FS+++ALFKDIPDV+GD  +G +SF+  LGQE+
Sbjct: 158 VHMQKFVLGKTTVVTRSLVFATAFMCFFSAVIALFKDIPDVDGDRDYGIQSFSVSLGQER 217

Query: 546 VFWFCINVLLTAYGTAVVIGAFSPYIFNKLVIVLSHSLLGFMLLVHARSIDLTNKDSVSS 725
           VFW C+N+LL AYG AVV+GA S ++ +K + +L H  L F+L + ARS+DLT+KDS++S
Sbjct: 218 VFWLCVNMLLIAYGAAVVVGASSTFLPSKFITILGHCTLAFILWLRARSVDLTSKDSITS 277

Query: 726 AYAFI 740
            Y FI
Sbjct: 278 FYMFI 282


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  271 bits (692), Expect = 2e-70
 Identities = 133/260 (51%), Positives = 182/260 (70%)
 Frame = +3

Query: 6   YFVEVVKAVLPALLMNLYVVALNQLSDVESDKINKPHLPLPSGELSMNTGKAIAATCFIL 185
           +FV ++KA++P++LMN+YVV LNQ+ DVE DK+NKP LPL SG+ SM TG  I     ++
Sbjct: 138 FFVGLLKAMVPSVLMNIYVVGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLM 197

Query: 186 SFAAGLRFYSPPSLLALVIYCLLGTVYSVDLPFLHWKNQPFLAGASIASVWSLLFPFGFF 365
           S   G+ F SPP   AL+I  LLGT YS+++P L WK  P LA + I  V +++    FF
Sbjct: 198 SVGMGIMFQSPPLFCALLISFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFF 257

Query: 366 IHMQKYVLGKPVVFTKSLKFLVAFQFVFSSMMALFKDIPDVEGDTKFGYKSFAAHLGQEK 545
            H+QK+VLG+ +V+TKS+ F VAF   FS+++ALFKDIPDV+GD +FG +SF   LGQ+K
Sbjct: 258 AHIQKHVLGRSIVYTKSVVFGVAFMCFFSTVIALFKDIPDVDGDREFGIQSFTVKLGQKK 317

Query: 546 VFWFCINVLLTAYGTAVVIGAFSPYIFNKLVIVLSHSLLGFMLLVHARSIDLTNKDSVSS 725
           VFW C+N+LL AYG A VIGA S  +  K   V  H  L  +L V A+S+DL++K++V+S
Sbjct: 318 VFWLCVNMLLMAYGAATVIGASSSSMPIKFATVFCHCALALVLWVRAQSVDLSSKEAVTS 377

Query: 726 AYAFIAQLFVAEFLLIPFIR 785
            Y FI +LF AE+ LIP +R
Sbjct: 378 FYMFIWKLFYAEYFLIPLVR 397


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  270 bits (691), Expect = 2e-70
 Identities = 134/262 (51%), Positives = 186/262 (70%), Gaps = 2/262 (0%)
 Frame = +3

Query: 6   YFVEVVKAVLPALLMNLYVVALNQLSDVESDKINKPHLPLPSGELSMNTGKAIAATCFIL 185
           YF+ ++KA++P++LMN+YVV LNQL DVE DK+NKP+LPL SG+ SM TG  I +   +L
Sbjct: 150 YFIGLLKALVPSVLMNIYVVGLNQLFDVEIDKVNKPYLPLASGKFSMATGILIVSASLLL 209

Query: 186 SFAAGLRFYSPPSLLALVIYCLLGTVYSVDLPFLHWKNQPFLAGASIASVWSLLFPFGFF 365
           S   G+ F SPP L AL+I   LG+VYS++LPFL WK   FLA + I  V +++    FF
Sbjct: 210 SLYMGITFQSPPLLAALLISFALGSVYSIELPFLRWKKHAFLAASCILIVRAMVVQLAFF 269

Query: 366 IHMQKYVLGKPVVFTKSLKFLVAFQFVFSSMMALFKDIPDVEGDTKFGYKSFAAHLGQEK 545
           +H+QK+VLGK +   +SL F  AF   FS+ +ALFKDIPDVEGD  +G +SF+  LGQE+
Sbjct: 270 VHIQKFVLGKSIFIPRSLMFATAFMCFFSAAIALFKDIPDVEGDRDYGIQSFSVSLGQER 329

Query: 546 VFWFCINVLLTAYGTAVVIGAFSP--YIFNKLVIVLSHSLLGFMLLVHARSIDLTNKDSV 719
           V W C+N+LL AYG AVV GA SP   +  KL+ ++ HS + ++L + A+ +DLT++ S+
Sbjct: 330 VLWLCVNMLLVAYGAAVVHGASSPSSLLPVKLITMIGHSTIAWILWMKAQFVDLTSQKSI 389

Query: 720 SSAYAFIAQLFVAEFLLIPFIR 785
           +S Y FI +LF AE+ LIPF+R
Sbjct: 390 TSFYMFIWKLFYAEYFLIPFVR 411


>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  266 bits (681), Expect = 3e-69
 Identities = 134/260 (51%), Positives = 182/260 (70%)
 Frame = +3

Query: 6   YFVEVVKAVLPALLMNLYVVALNQLSDVESDKINKPHLPLPSGELSMNTGKAIAATCFIL 185
           +FV  +KA++P++ MN+YVV LNQL DVE DK+NKP+LPL SGE SM  GKAI +   ++
Sbjct: 142 FFVGYLKALIPSIFMNIYVVGLNQLFDVEIDKVNKPNLPLASGEYSMGLGKAIVSAFGLM 201

Query: 186 SFAAGLRFYSPPSLLALVIYCLLGTVYSVDLPFLHWKNQPFLAGASIASVWSLLFPFGFF 365
           SFA G+ F SPP   AL+I  L G+ YSV+LP L WK   FLA  SI  V ++     FF
Sbjct: 202 SFAMGIVFQSPPVFFALLICFLFGSAYSVELPLLRWKRNAFLAAFSILMVRAITVNLAFF 261

Query: 366 IHMQKYVLGKPVVFTKSLKFLVAFQFVFSSMMALFKDIPDVEGDTKFGYKSFAAHLGQEK 545
            H+QKYVLG+P+VF +SL F      +F++++ALFKDIPDV+GD  FG +SF+  LGQ++
Sbjct: 262 YHIQKYVLGRPMVFPRSLCFATVCISMFTTVIALFKDIPDVDGDRDFGIQSFSVCLGQKR 321

Query: 546 VFWFCINVLLTAYGTAVVIGAFSPYIFNKLVIVLSHSLLGFMLLVHARSIDLTNKDSVSS 725
           VFW CI +LL AY +A+VIGA S ++ +KLV V+ H  L  +L   A S++L +  S++S
Sbjct: 322 VFWLCIGILLIAYASALVIGASSSFLLSKLVTVIGHCTLASILWRRANSVNLEDNSSMTS 381

Query: 726 AYAFIAQLFVAEFLLIPFIR 785
            Y  I +LF AE+LLIPF+R
Sbjct: 382 FYMSIWKLFYAEYLLIPFVR 401


>gb|AFB74212.1| homogentisate phytyltransferase [Brassica napus]
          Length = 394

 Score =  258 bits (658), Expect = 2e-66
 Identities = 124/259 (47%), Positives = 182/259 (70%)
 Frame = +3

Query: 9   FVEVVKAVLPALLMNLYVVALNQLSDVESDKINKPHLPLPSGELSMNTGKAIAATCFILS 188
           F  +++AV+ AL+MN+Y+V LNQLSDVE DK+NKP+LPL SGE S+ TG AI A+ FI+S
Sbjct: 136 FTGILEAVVAALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVKTGIAIVASFFIMS 195

Query: 189 FAAGLRFYSPPSLLALVIYCLLGTVYSVDLPFLHWKNQPFLAGASIASVWSLLFPFGFFI 368
           F  G    S P   AL +  +LGT YS++LP L WK    +A   I +V +++    F++
Sbjct: 196 FWLGWIVGSWPLFWALFVSFILGTAYSINLPLLRWKRFALVAAMCILAVRAIIVQIAFYL 255

Query: 369 HMQKYVLGKPVVFTKSLKFLVAFQFVFSSMMALFKDIPDVEGDTKFGYKSFAAHLGQEKV 548
           H+Q +V G+PV+FT+ L F  AF   FS ++ALFKDIPD+EGD  FG +SF+  LGQ++V
Sbjct: 256 HIQTHVFGRPVMFTRPLIFATAFMSFFSVVIALFKDIPDIEGDKIFGIRSFSVTLGQKRV 315

Query: 549 FWFCINVLLTAYGTAVVIGAFSPYIFNKLVIVLSHSLLGFMLLVHARSIDLTNKDSVSSA 728
           FW C+++L  AY  A+++GA SP+I++K + V+ H +L   L   A+S+DL++K  ++S 
Sbjct: 316 FWTCVSLLQMAYAVAILVGATSPFIWSKFISVVGHVILATTLWTRAKSVDLSSKTEITSC 375

Query: 729 YAFIAQLFVAEFLLIPFIR 785
           Y FI +LF AE+LL+PF++
Sbjct: 376 YMFIWKLFYAEYLLLPFLK 394


Top