BLASTX nr result

ID: Coptis21_contig00016662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016662
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527...   187   8e-46
ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259...   180   9e-44
ref|XP_002516851.1| protein binding protein, putative [Ricinus c...   178   4e-43
ref|XP_003594026.1| E3 ubiquitin-protein ligase MARCH1 [Medicago...   176   1e-42
ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42

>ref|XP_003546106.1| PREDICTED: uncharacterized protein LOC100527094 [Glycine max]
          Length = 422

 Score =  187 bits (475), Expect = 8e-46
 Identities = 92/148 (62%), Positives = 111/148 (75%)
 Frame = +3

Query: 36  CSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTLLRVHSSAXXXXXXXXXXXX 215
           CSCKGDLRL HE C++KWFS KG+K+CDVCRQEV+NLPVTLLRV SS             
Sbjct: 232 CSCKGDLRLVHEECLIKWFSTKGDKECDVCRQEVQNLPVTLLRVTSSVRQNRQLQGQHNL 291

Query: 216 PTPQPLSAWHDLVVLVLISSISYFFVLEQLLSEKYKAGALAYSAPISFTLGLLGSLFAIV 395
             P+ +SAW D VVLVLIS+I YFF LEQLL  + K  A+  +AP +FTLGLL S+FA++
Sbjct: 292 H-PESISAWQDFVVLVLISTICYFFFLEQLLLPELKTQAIIIAAPFAFTLGLLASIFAVI 350

Query: 396 IAFREYTWTYAALEFALVALNLHPFYTV 479
           +A +EY WTYAALEFALVAL +H FYT+
Sbjct: 351 LAIKEYIWTYAALEFALVALTVHLFYTM 378


>ref|XP_002277762.1| PREDICTED: uncharacterized protein LOC100259554 [Vitis vinifera]
           gi|297736929|emb|CBI26130.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/148 (60%), Positives = 106/148 (71%)
 Frame = +3

Query: 36  CSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTLLRVHSSAXXXXXXXXXXXX 215
           CSCKG LRL HE C +KWF+ KGNK CDVCRQEV+NLPVTLLRV +SA            
Sbjct: 238 CSCKGALRLLHEDCAIKWFTTKGNKTCDVCRQEVQNLPVTLLRVPTSAQRDNRQAHNQQS 297

Query: 216 PTPQPLSAWHDLVVLVLISSISYFFVLEQLLSEKYKAGALAYSAPISFTLGLLGSLFAIV 395
              + +S W D VVLVLIS+I YFF LEQLL    K  A+  +AP SFTLGLL S+FAI+
Sbjct: 298 LNSRSVSVWQDFVVLVLISTICYFFFLEQLLIHDMKTQAIVVAAPFSFTLGLLASIFAII 357

Query: 396 IAFREYTWTYAALEFALVALNLHPFYTV 479
           +A +EY WTYAALEFALVA+ +H FY++
Sbjct: 358 LAIKEYIWTYAALEFALVAIIVHLFYSL 385


>ref|XP_002516851.1| protein binding protein, putative [Ricinus communis]
           gi|223543939|gb|EEF45465.1| protein binding protein,
           putative [Ricinus communis]
          Length = 441

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/148 (58%), Positives = 106/148 (71%)
 Frame = +3

Query: 36  CSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTLLRVHSSAXXXXXXXXXXXX 215
           CSCKG LRL HE C +KWFSIKGNK C+VC QEV+NLPVTLLRV  SA            
Sbjct: 213 CSCKGALRLVHEECAIKWFSIKGNKNCEVCGQEVKNLPVTLLRVTGSAQSNNRQDLSHQR 272

Query: 216 PTPQPLSAWHDLVVLVLISSISYFFVLEQLLSEKYKAGALAYSAPISFTLGLLGSLFAIV 395
              + +SAW D VVLV+IS+I YFF LEQLL    +  A+  +AP +FTLGLL S+FAI+
Sbjct: 273 FRSEAISAWQDFVVLVIISTICYFFFLEQLLIHDMRTQAIIIAAPFAFTLGLLASIFAII 332

Query: 396 IAFREYTWTYAALEFALVALNLHPFYTV 479
           +A REY WTYAAL+FALVA+ +H FY++
Sbjct: 333 LAIREYIWTYAALQFALVAIFVHLFYSM 360


>ref|XP_003594026.1| E3 ubiquitin-protein ligase MARCH1 [Medicago truncatula]
           gi|355483074|gb|AES64277.1| E3 ubiquitin-protein ligase
           MARCH1 [Medicago truncatula]
          Length = 424

 Score =  176 bits (447), Expect = 1e-42
 Identities = 87/148 (58%), Positives = 104/148 (70%)
 Frame = +3

Query: 36  CSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTLLRVHSSAXXXXXXXXXXXX 215
           C CKGDLRL HE C++KW + KG  KC++C + V+NLPVTLLRV SS             
Sbjct: 233 CYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSSVQRRNRPLQDHQN 292

Query: 216 PTPQPLSAWHDLVVLVLISSISYFFVLEQLLSEKYKAGALAYSAPISFTLGLLGSLFAIV 395
              + +SAW D VVLVLIS+I YFF LEQLL    K  A+  SAP SFTLGLLGS+FAIV
Sbjct: 293 FNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFSFTLGLLGSVFAIV 352

Query: 396 IAFREYTWTYAALEFALVALNLHPFYTV 479
           +A +EY WTYAALEFALVA+ +H FYT+
Sbjct: 353 LAIKEYIWTYAALEFALVAITVHLFYTM 380


>ref|XP_002312716.1| predicted protein [Populus trichocarpa] gi|222852536|gb|EEE90083.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  174 bits (440), Expect = 9e-42
 Identities = 87/148 (58%), Positives = 104/148 (70%)
 Frame = +3

Query: 36  CSCKGDLRLTHEACVLKWFSIKGNKKCDVCRQEVRNLPVTLLRVHSSAXXXXXXXXXXXX 215
           CSCKGDLRL HE C +KWFS KGNK CDVC QEV+NLPVTLLR  S A            
Sbjct: 209 CSCKGDLRLVHEDCAIKWFSTKGNKYCDVCGQEVKNLPVTLLRATSLAQRNNRQEQSRQR 268

Query: 216 PTPQPLSAWHDLVVLVLISSISYFFVLEQLLSEKYKAGALAYSAPISFTLGLLGSLFAIV 395
              Q +SAW D VVLVLIS+I YFF LEQ+L    K  A+  +AP +FTLGLL S+FA++
Sbjct: 269 L--QQISAWQDFVVLVLISTICYFFFLEQVLIRDMKTQAIIVAAPFAFTLGLLSSIFAVI 326

Query: 396 IAFREYTWTYAALEFALVALNLHPFYTV 479
           +A REY WT+AALEFA VA+ +H FY++
Sbjct: 327 LAIREYIWTFAALEFASVAITVHIFYSM 354


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