BLASTX nr result

ID: Coptis21_contig00016654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016654
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285815.1| PREDICTED: membrane-anchored ubiquitin-fold ...   185   2e-44
ref|NP_001048133.1| Os02g0750600 [Oryza sativa Japonica Group] g...   175   2e-41
ref|XP_003570633.1| PREDICTED: membrane-anchored ubiquitin-fold ...   173   9e-41
ref|XP_002513864.1| conserved hypothetical protein [Ricinus comm...   172   1e-40
gb|AFW64466.1| hypothetical protein ZEAMMB73_605636 [Zea mays]        172   2e-40

>ref|XP_002285815.1| PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Vitis
           vinifera] gi|302141907|emb|CBI19110.3| unnamed protein
           product [Vitis vinifera]
          Length = 118

 Score =  185 bits (469), Expect = 2e-44
 Identities = 92/119 (77%), Positives = 107/119 (89%), Gaps = 1/119 (0%)
 Frame = +3

Query: 315 MAGEDLVELKFRLFDGTDIGPNKYNPTTTTIGALKEVILSQWPQDKENGPKAINDVKLIN 494
           MAGE+L+ELKFRL DGTDIGPNKYNPTT+ +G+LKE IL+QWP+DKENGPK IND+KLIN
Sbjct: 1   MAGEELIELKFRLADGTDIGPNKYNPTTS-VGSLKEKILAQWPKDKENGPKTINDMKLIN 59

Query: 495 AGKILENHRSLAESRVPVAELPGGVITMHVVVQPPMFDKNNEKLLANSP-KNRCSCSIL 668
           AGKILEN+R+LAESR+ V ELPGGVITMHVVV+PP+ DKN EK   +SP K+RCSCSIL
Sbjct: 60  AGKILENNRTLAESRLLVGELPGGVITMHVVVRPPLSDKNTEKQQDDSPKKSRCSCSIL 118


>ref|NP_001048133.1| Os02g0750600 [Oryza sativa Japonica Group]
           gi|75134491|sp|Q6Z8K4.1|MUB3_ORYSJ RecName:
           Full=Membrane-anchored ubiquitin-fold protein 3;
           Short=Membrane-anchored ub-fold protein 3; AltName:
           Full=OsMUB3; Flags: Precursor
           gi|46390208|dbj|BAD15639.1| putative NTGP5 [Oryza sativa
           Japonica Group] gi|113537664|dbj|BAF10047.1|
           Os02g0750600 [Oryza sativa Japonica Group]
           gi|149392483|gb|ABR26044.1| ubiquitin family protein
           [Oryza sativa Indica Group] gi|215679386|dbj|BAG96526.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|215694651|dbj|BAG89842.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737488|dbj|BAG96618.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191587|gb|EEC74014.1| hypothetical protein
           OsI_08953 [Oryza sativa Indica Group]
           gi|222623680|gb|EEE57812.1| hypothetical protein
           OsJ_08399 [Oryza sativa Japonica Group]
          Length = 119

 Score =  175 bits (443), Expect = 2e-41
 Identities = 85/117 (72%), Positives = 104/117 (88%), Gaps = 1/117 (0%)
 Frame = +3

Query: 321 GEDLVELKFRLFDGTDIGPNKYNPTTTTIGALKEVILSQWPQDKENGPKAINDVKLINAG 500
           G++ +E+KFRLFDGTDIGP+KY+P+TT + ALKE IL++WPQDKE  PK +ND+KLINAG
Sbjct: 4   GKEPIEVKFRLFDGTDIGPSKYDPSTT-VSALKEFILARWPQDKEITPKTVNDLKLINAG 62

Query: 501 KILENHRSLAESRVPVAELPGGVITMHVVVQPPMFDKNNEKLLANSPK-NRCSCSIL 668
           +ILEN+R+LAESRVPV E+PGGVITMHVVV+PP  DKN+EK LANSPK NRC C+IL
Sbjct: 63  RILENNRTLAESRVPVGEVPGGVITMHVVVRPPQPDKNSEKQLANSPKQNRCGCTIL 119


>ref|XP_003570633.1| PREDICTED: membrane-anchored ubiquitin-fold protein 3-like
           [Brachypodium distachyon]
          Length = 119

 Score =  173 bits (438), Expect = 9e-41
 Identities = 83/117 (70%), Positives = 103/117 (88%), Gaps = 1/117 (0%)
 Frame = +3

Query: 321 GEDLVELKFRLFDGTDIGPNKYNPTTTTIGALKEVILSQWPQDKENGPKAINDVKLINAG 500
           G++ +E+KFRLFDGTDIGP+KY+P+TT + ALK+ IL++WPQDKE  PK +ND+KLINAG
Sbjct: 4   GKEPIEVKFRLFDGTDIGPSKYDPSTT-VSALKDFILARWPQDKEINPKTVNDLKLINAG 62

Query: 501 KILENHRSLAESRVPVAELPGGVITMHVVVQPPMFDKNNEKLLANSPK-NRCSCSIL 668
           +ILEN+R+LAESRVPV E+PGGVITMHVVV+PP  DKN+ K LANSPK NRC C+IL
Sbjct: 63  RILENNRTLAESRVPVGEVPGGVITMHVVVRPPQADKNSAKQLANSPKQNRCGCTIL 119


>ref|XP_002513864.1| conserved hypothetical protein [Ricinus communis]
           gi|223546950|gb|EEF48447.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  172 bits (437), Expect = 1e-40
 Identities = 85/119 (71%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
 Frame = +3

Query: 315 MAGEDLVELKFRLFDGTDIGPNKYNPTTTTIGALKEVILSQWPQDKENGPKAINDVKLIN 494
           MAGEDL+ELKFRL DGTDIGPNKY P TT +  LKE I++QWP+DKENGPK +ND+KLIN
Sbjct: 1   MAGEDLIELKFRLADGTDIGPNKYTPATTVV-TLKEKIIAQWPKDKENGPKTVNDLKLIN 59

Query: 495 AGKILENHRSLAESRVPVAELPGGVITMHVVVQPPMFDKNNEKLLANSPKNR-CSCSIL 668
            GKILEN+R+LAESR+PV ELPGGVITMHVV++PPM +K ++KL  +S K   CSCSIL
Sbjct: 60  GGKILENNRTLAESRLPVGELPGGVITMHVVLRPPMPEKISDKLRKDSSKKTGCSCSIL 118


>gb|AFW64466.1| hypothetical protein ZEAMMB73_605636 [Zea mays]
          Length = 119

 Score =  172 bits (435), Expect = 2e-40
 Identities = 81/118 (68%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
 Frame = +3

Query: 318 AGEDLVELKFRLFDGTDIGPNKYNPTTTTIGALKEVILSQWPQDKENGPKAINDVKLINA 497
           +G++ +E++FRLFDGTDIGP KY+P+TT + +LKE IL++WPQDK+  PK +ND+KLIN 
Sbjct: 3   SGKEPIEVRFRLFDGTDIGPTKYDPSTT-VSSLKEFILARWPQDKDIAPKTVNDLKLING 61

Query: 498 GKILENHRSLAESRVPVAELPGGVITMHVVVQPPMFDKNNEKLLANSPK-NRCSCSIL 668
           G+ILEN+R+LAESRVPV E+PGGVITMHVVV+PP  DKN+EK LANSPK NRC C+IL
Sbjct: 62  GRILENNRTLAESRVPVGEIPGGVITMHVVVRPPQADKNSEKQLANSPKQNRCGCTIL 119


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