BLASTX nr result

ID: Coptis21_contig00016643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016643
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285596.2| PREDICTED: uncharacterized protein LOC100265...    71   8e-11
ref|XP_002888251.1| predicted protein [Arabidopsis lyrata subsp....    70   1e-10
ref|XP_002264303.2| PREDICTED: uncharacterized protein LOC100257...    68   7e-10
ref|XP_002518318.1| catalytic, putative [Ricinus communis] gi|22...    68   9e-10
ref|XP_003580912.1| PREDICTED: uncharacterized protein LOC100824...    67   2e-09

>ref|XP_002285596.2| PREDICTED: uncharacterized protein LOC100265997 [Vitis vinifera]
           gi|302142108|emb|CBI19311.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/75 (53%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   PRTIFSP--NAKSRRIRRVYRTNMLPSSSAEFCFSSLNNMDGVARPSLFPLHRTKTLHLV 174
           P  IF P   A S          + PSSS   C SS+++MD  A   L+PLHR KT+HLV
Sbjct: 13  PTPIFKPATTAASPSSYSPLLPQIRPSSSVLRC-SSISDMDATAGQGLYPLHRCKTIHLV 71

Query: 175 RHAQGIHNVEGEKNH 219
           RHAQGIHNVEGEK+H
Sbjct: 72  RHAQGIHNVEGEKDH 86


>ref|XP_002888251.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334092|gb|EFH64510.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 343

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = +1

Query: 91  CFSSLNNMDGVARPS--LFPLHRTKTLHLVRHAQGIHNVEGEKNHE 222
           C SSL++ D  A+PS  L+PLHR KT+HLVRHAQG+HNVEGEKNHE
Sbjct: 34  CCSSLSSHDMEAKPSQGLYPLHRCKTIHLVRHAQGVHNVEGEKNHE 79


>ref|XP_002264303.2| PREDICTED: uncharacterized protein LOC100257829 [Vitis vinifera]
          Length = 332

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/46 (71%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
 Frame = +1

Query: 91  CFSSLN--NMDGVARPSLFPLHRTKTLHLVRHAQGIHNVEGEKNHE 222
           C SSL+  +MD  A PSLFPLHR KTLHLVRHAQGIHNV+G+KN++
Sbjct: 37  CRSSLSVADMDSGAGPSLFPLHRCKTLHLVRHAQGIHNVDGDKNYK 82


>ref|XP_002518318.1| catalytic, putative [Ricinus communis] gi|223542538|gb|EEF44078.1|
           catalytic, putative [Ricinus communis]
          Length = 338

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/50 (64%), Positives = 40/50 (80%)
 Frame = +1

Query: 73  SSSAEFCFSSLNNMDGVARPSLFPLHRTKTLHLVRHAQGIHNVEGEKNHE 222
           SSS+ F    + +MDG   PSLFPLHR KT+HLVRHAQG+HNVEG+KN++
Sbjct: 45  SSSSSF---PVADMDGAPGPSLFPLHRCKTIHLVRHAQGMHNVEGDKNYK 91


>ref|XP_003580912.1| PREDICTED: uncharacterized protein LOC100824766 [Brachypodium
           distachyon]
          Length = 339

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/73 (47%), Positives = 46/73 (63%)
 Frame = +1

Query: 1   PRTIFSPNAKSRRIRRVYRTNMLPSSSAEFCFSSLNNMDGVARPSLFPLHRTKTLHLVRH 180
           P +  +P++ S  +RR        SSSAE        M   A  +++PLHR+KT+HLVRH
Sbjct: 27  PSSAAAPSSSSSSVRRRRANLRCSSSSAE--------MAATAGTAIYPLHRSKTIHLVRH 78

Query: 181 AQGIHNVEGEKNH 219
           AQGIHNVEGEK+H
Sbjct: 79  AQGIHNVEGEKDH 91


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