BLASTX nr result

ID: Coptis21_contig00016641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016641
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885390.1| ubiquitin-specific protease 14 [Arabidopsis ...   164   5e-39
gb|AAG42755.1|AF302664_1 ubiquitin-specific protease 14 [Arabido...   164   7e-39
ref|NP_566666.2| ubiquitin carboxyl-terminal hydrolase 14 [Arabi...   164   7e-39
dbj|BAB01171.1| ubiquitin isopeptidase T [Arabidopsis thaliana]       164   7e-39
ref|XP_002330384.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38

>ref|XP_002885390.1| ubiquitin-specific protease 14 [Arabidopsis lyrata subsp. lyrata]
           gi|297331230|gb|EFH61649.1| ubiquitin-specific protease
           14 [Arabidopsis lyrata subsp. lyrata]
          Length = 797

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = +3

Query: 6   MEQLRSNLSRVRIPEPTNRIYKQECCISFDTPKSEGGLFIDMKSFLAFGKDYVCWNYEKT 185
           ME LRSNLSRV+IPEPT+RIYK ECCISFDTP+SEGGLF+DM SFLAFGKDYV WNYEKT
Sbjct: 1   MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60

Query: 186 ANPIYLHIKHTLKSIPEDRPLKKPTLLA 269
            NP+YLHIK T KSIPEDRPLKKPTLLA
Sbjct: 61  GNPVYLHIKQTTKSIPEDRPLKKPTLLA 88


>gb|AAG42755.1|AF302664_1 ubiquitin-specific protease 14 [Arabidopsis thaliana]
          Length = 797

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = +3

Query: 6   MEQLRSNLSRVRIPEPTNRIYKQECCISFDTPKSEGGLFIDMKSFLAFGKDYVCWNYEKT 185
           ME LRSNLSRV+IPEPT+RIYK ECCISFDTP+SEGGLF+DM SFLAFGKDYV WNYEKT
Sbjct: 1   MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60

Query: 186 ANPIYLHIKHTLKSIPEDRPLKKPTLLA 269
            NP+YLHIK T KSIPEDRPLKKPTLLA
Sbjct: 61  GNPVYLHIKQTRKSIPEDRPLKKPTLLA 88


>ref|NP_566666.2| ubiquitin carboxyl-terminal hydrolase 14 [Arabidopsis thaliana]
           gi|73920153|sp|Q8L6Y1.1|UBP14_ARATH RecName:
           Full=Ubiquitin carboxyl-terminal hydrolase 14; AltName:
           Full=Deubiquitinating enzyme 14; Short=AtUBP14; AltName:
           Full=TITAN-6 protein; AltName: Full=Ubiquitin
           thioesterase 14; AltName:
           Full=Ubiquitin-specific-processing protease 14
           gi|22655294|gb|AAM98237.1| ubiquitin-specific protease
           14 (UBP14), putative [Arabidopsis thaliana]
           gi|110742080|dbj|BAE98971.1| putative ubiquitin
           isopeptidase T [Arabidopsis thaliana]
           gi|332642884|gb|AEE76405.1| ubiquitin carboxyl-terminal
           hydrolase 14 [Arabidopsis thaliana]
          Length = 797

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = +3

Query: 6   MEQLRSNLSRVRIPEPTNRIYKQECCISFDTPKSEGGLFIDMKSFLAFGKDYVCWNYEKT 185
           ME LRSNLSRV+IPEPT+RIYK ECCISFDTP+SEGGLF+DM SFLAFGKDYV WNYEKT
Sbjct: 1   MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60

Query: 186 ANPIYLHIKHTLKSIPEDRPLKKPTLLA 269
            NP+YLHIK T KSIPEDRPLKKPTLLA
Sbjct: 61  GNPVYLHIKQTRKSIPEDRPLKKPTLLA 88


>dbj|BAB01171.1| ubiquitin isopeptidase T [Arabidopsis thaliana]
          Length = 797

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/88 (86%), Positives = 81/88 (92%)
 Frame = +3

Query: 6   MEQLRSNLSRVRIPEPTNRIYKQECCISFDTPKSEGGLFIDMKSFLAFGKDYVCWNYEKT 185
           ME LRSNLSRV+IPEPT+RIYK ECCISFDTP+SEGGLF+DM SFLAFGKDYV WNYEKT
Sbjct: 1   MELLRSNLSRVQIPEPTHRIYKHECCISFDTPRSEGGLFVDMNSFLAFGKDYVSWNYEKT 60

Query: 186 ANPIYLHIKHTLKSIPEDRPLKKPTLLA 269
            NP+YLHIK T KSIPEDRPLKKPTLLA
Sbjct: 61  GNPVYLHIKQTRKSIPEDRPLKKPTLLA 88


>ref|XP_002330384.1| predicted protein [Populus trichocarpa] gi|222871769|gb|EEF08900.1|
           predicted protein [Populus trichocarpa]
          Length = 807

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/88 (82%), Positives = 81/88 (92%)
 Frame = +3

Query: 6   MEQLRSNLSRVRIPEPTNRIYKQECCISFDTPKSEGGLFIDMKSFLAFGKDYVCWNYEKT 185
           M+ LRSNLSRVRIPEPTNRIYKQECC+SF+TP+SEGGLF+DM +FLAFGKDYV WNYEKT
Sbjct: 1   MDLLRSNLSRVRIPEPTNRIYKQECCVSFETPRSEGGLFVDMTTFLAFGKDYVGWNYEKT 60

Query: 186 ANPIYLHIKHTLKSIPEDRPLKKPTLLA 269
            NP+YLHIK T K +PEDRPLKKPTLLA
Sbjct: 61  GNPVYLHIKQTRKVVPEDRPLKKPTLLA 88


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