BLASTX nr result

ID: Coptis21_contig00016639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016639
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis ciner...   189   3e-46
gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata]        181   1e-43
ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [S...   180   2e-43
ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [S...   180   2e-43
ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [S...   178   5e-43

>ref|XP_001835316.2| transcriptional factor B3 [Coprinopsis cinerea okayama7#130]
            gi|298403796|gb|EAU86521.2| transcriptional factor B3
            [Coprinopsis cinerea okayama7#130]
          Length = 1655

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/170 (56%), Positives = 129/170 (75%), Gaps = 2/170 (1%)
 Frame = -2

Query: 566  SGNANSYPTEYLNSLDPSGLPPFKLTLKKGCPVMLLRNIAPTDGLCNGTRLMIVCTKPHV 387
            S  ++  P E+L +++ SGLPP +L++K G P++LLRN++P  GLCNGTR+++      V
Sbjct: 1485 SSASHPVPIEFLRTVNASGLPPGELSMKLGSPLILLRNLSPKHGLCNGTRMVVTRMSDRV 1544

Query: 386  VQVLILTGEKAGNVRFIPRISLTPSTNE-IPFQMTRRQFPIRLSFAMTINKSQGQSVKYV 210
            ++V I+ GE  G+  FIPRISL PS N+ I  +  RRQFP+RL+FA+TINK+QGQSVKYV
Sbjct: 1545 LEVQIIGGECNGDRVFIPRISLIPSDNDDILIKFRRRQFPVRLAFALTINKAQGQSVKYV 1604

Query: 209  GIDLRNPVFSHGQLYVAISRCTSSKRISVILPP-DSSNHTTNIVYPEVLL 63
            G+DLRNPVF+HGQLYVA+SR TS +RI V+LP  +    T N+VYPEVLL
Sbjct: 1605 GLDLRNPVFAHGQLYVALSRATSRQRIKVLLPDGEQECSTPNVVYPEVLL 1654


>gb|ABF70031.1| DNA helicase homolog, putative [Musa acuminata]
          Length = 1605

 Score =  181 bits (458), Expect = 1e-43
 Identities = 97/174 (55%), Positives = 121/174 (69%), Gaps = 11/174 (6%)
 Frame = -2

Query: 554  NSYPTEYLNSLDPSGLPPFKLTLKKGCPVMLLRNIAPTDGLCNGTRLMIVCTKPHVVQVL 375
            N YP+E+LN+L P+GLPP  L LK GCPV+LLRNI P  GLCNGTRL++   + ++V   
Sbjct: 1430 NYYPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCNGTRLVVRGFQRNIVDAE 1489

Query: 374  ILTGEKAGNVRFIPRISLTPSTNEI-PFQMTRRQFPIRLSFAMTINKSQGQSVKYVGIDL 198
            I+ G+ AG   F+PRI L PS +E+ PFQ  R+QFPIRLSFAMTINK+QGQ++  VG+ L
Sbjct: 1490 IMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYL 1549

Query: 197  RNPVFSHGQLYVAISRCTSSKRISVI-LPPDSSN---------HTTNIVYPEVL 66
              PVFSHGQLYVAISR T+   I ++ +PP   N          T NIVY EVL
Sbjct: 1550 PEPVFSHGQLYVAISRATARSNIRILAVPPSDKNDKKQKNNGTFTKNIVYKEVL 1603


>ref|XP_002446095.1| hypothetical protein SORBIDRAFT_06g001660 [Sorghum bicolor]
            gi|241937278|gb|EES10423.1| hypothetical protein
            SORBIDRAFT_06g001660 [Sorghum bicolor]
          Length = 1484

 Score =  180 bits (456), Expect = 2e-43
 Identities = 95/176 (53%), Positives = 122/176 (69%), Gaps = 13/176 (7%)
 Frame = -2

Query: 554  NSYPTEYLNSLDPSGLPPFKLTLKKGCPVMLLRNIAPTDGLCNGTRLMIVCTKPHVVQVL 375
            N YP+E+LN+L P+GLPP  L LK GCPV+LLRNI P  GLCNGTRL++   + +++   
Sbjct: 1307 NYYPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCNGTRLVVRGFQRNIIDAE 1366

Query: 374  ILTGEKAGNVRFIPRISLTPSTNEI-PFQMTRRQFPIRLSFAMTINKSQGQSVKYVGIDL 198
            I+ G+ AG   F+PRI L PS +E+ PFQ  R+QFPIRLSFAMTINK+QGQ++  VG+ L
Sbjct: 1367 IMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYL 1426

Query: 197  RNPVFSHGQLYVAISRCTSSKRISV-ILPPDSSN-----------HTTNIVYPEVL 66
              PVFSHGQLYVA+SR T+   I + ++PP   N           +T NIVY EVL
Sbjct: 1427 PEPVFSHGQLYVALSRATARSNIRILVVPPSDRNDKKNKTKINGIYTKNIVYKEVL 1482


>ref|XP_002453364.1| hypothetical protein SORBIDRAFT_04g004660 [Sorghum bicolor]
            gi|241933195|gb|EES06340.1| hypothetical protein
            SORBIDRAFT_04g004660 [Sorghum bicolor]
          Length = 1145

 Score =  180 bits (456), Expect = 2e-43
 Identities = 96/174 (55%), Positives = 121/174 (69%), Gaps = 11/174 (6%)
 Frame = -2

Query: 554  NSYPTEYLNSLDPSGLPPFKLTLKKGCPVMLLRNIAPTDGLCNGTRLMIVCTKPHVVQVL 375
            N YP+E+LN+L P+GLPP  L LK GCPV+LLRNI P  GLCNGTRL++   + ++V   
Sbjct: 970  NYYPSEFLNTLTPNGLPPHVLKLKIGCPVILLRNIDPAGGLCNGTRLVVRGFQRNIVDAE 1029

Query: 374  ILTGEKAGNVRFIPRISLTPSTNEI-PFQMTRRQFPIRLSFAMTINKSQGQSVKYVGIDL 198
            I+ G+ AG   F+PRI L PS +E+ PFQ  R+QFPIRLSFAMTINK+QGQ++  VG+ L
Sbjct: 1030 IMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNVGVYL 1089

Query: 197  RNPVFSHGQLYVAISRCTSSKRISVI-LPPDSSN---------HTTNIVYPEVL 66
              PVFSHGQLYVA+SR T+   I ++ +PP   N          T NIVY EVL
Sbjct: 1090 PEPVFSHGQLYVALSRATARSNIRILAVPPSDKNDKKQKNNGTFTKNIVYKEVL 1143


>ref|XP_002460012.1| hypothetical protein SORBIDRAFT_02g020820 [Sorghum bicolor]
            gi|241923389|gb|EER96533.1| hypothetical protein
            SORBIDRAFT_02g020820 [Sorghum bicolor]
          Length = 1234

 Score =  178 bits (452), Expect = 5e-43
 Identities = 94/176 (53%), Positives = 124/176 (70%), Gaps = 13/176 (7%)
 Frame = -2

Query: 554  NSYPTEYLNSLDPSGLPPFKLTLKKGCPVMLLRNIAPTDGLCNGTRLMIVCTKPHVVQVL 375
            N YP+E+LN+L P+GLPP  L LK GCP++LLRNI P  GLCNGTRL++   + +++   
Sbjct: 1057 NYYPSEFLNTLTPNGLPPHVLKLKIGCPIILLRNIDPAGGLCNGTRLVVRGFQRNIIDAE 1116

Query: 374  ILTGEKAGNVRFIPRISLTPSTNEI-PFQMTRRQFPIRLSFAMTINKSQGQSVKYVGIDL 198
            I+ G+ AG   F+PRI L PS +E+ PFQ  R+QFPIRLSFAMTINK+QGQ++  +G+ L
Sbjct: 1117 IMVGDHAGKRIFLPRIPLCPSDDEMFPFQFKRKQFPIRLSFAMTINKAQGQTLPNIGVYL 1176

Query: 197  RNPVFSHGQLYVAISRCTS--SKRISVILPPDSSN----------HTTNIVYPEVL 66
              PVFSHGQLYVA+SR T+  + RI  +LP D ++          +T NIVY EVL
Sbjct: 1177 PEPVFSHGQLYVALSRATARLNIRILAVLPSDKNDKKKNTKINGTYTKNIVYKEVL 1232


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