BLASTX nr result

ID: Coptis21_contig00016631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016631
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263113.1| PREDICTED: uncharacterized protein LOC100247...    60   1e-07
ref|XP_002879456.1| hypothetical protein ARALYDRAFT_902425 [Arab...    59   5e-07
ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|1...    58   9e-07
gb|AAO42247.1| unknown protein [Arabidopsis thaliana]                  57   2e-06
ref|NP_001189667.1| uncharacterized protein [Arabidopsis thalian...    57   2e-06

>ref|XP_002263113.1| PREDICTED: uncharacterized protein LOC100247256 [Vitis vinifera]
          Length = 194

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
 Frame = +2

Query: 38  MEAPDMASITA-LERSLQNCSLNNRTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXX--- 205
           M AP+MA+ITA LERSLQNCSLN+ + ++G G     GI                     
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHSSSNSGEGSGVEDGIGISSTSDDASPENLSHSDTTL 60

Query: 206 ----HVSLPYHWEQCLDLK 250
                +SLPYHWEQCLDLK
Sbjct: 61  ELNSQMSLPYHWEQCLDLK 79


>ref|XP_002879456.1| hypothetical protein ARALYDRAFT_902425 [Arabidopsis lyrata subsp.
           lyrata] gi|297325295|gb|EFH55715.1| hypothetical protein
           ARALYDRAFT_902425 [Arabidopsis lyrata subsp. lyrata]
          Length = 183

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/72 (47%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = +2

Query: 38  MEAPDMASIT-ALERSLQNCSLNNRTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXXHVS 214
           M+AP+M +IT +LE+S+QNCSLN+R R   G G  RS                    H+S
Sbjct: 1   MKAPNMETITESLEKSMQNCSLNDRRRRVVGDGFGRSS---SNEHTPISDRTLELNSHLS 57

Query: 215 LPYHWEQCLDLK 250
           LP HWEQCLDLK
Sbjct: 58  LPCHWEQCLDLK 69


>ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|118485800|gb|ABK94748.1|
           unknown [Populus trichocarpa]
           gi|222845121|gb|EEE82668.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/81 (48%), Positives = 46/81 (56%), Gaps = 10/81 (12%)
 Frame = +2

Query: 38  MEAPDMASITA-LERSLQNCSLNNRT--RSNG---GGGVFRSG----IXXXXXXXXXXXX 187
           M AP+MA+ITA LERSLQNCSLN+    +S+G   GG   RS     +            
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELDSQNHLQQNSDT 60

Query: 188 XXXXXXHVSLPYHWEQCLDLK 250
                 H+SLPYHWEQCLDLK
Sbjct: 61  SLELKSHLSLPYHWEQCLDLK 81


>gb|AAO42247.1| unknown protein [Arabidopsis thaliana]
          Length = 189

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +2

Query: 38  MEAPDMASIT-ALERSLQNCSLNNRTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXXHVS 214
           M+AP+M +IT +LE+S+ NCSLN+R R   G G  RS                    H+S
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSS--SNEHMTPISDRTLELNSHLS 58

Query: 215 LPYHWEQCLDLK 250
           LP HWEQCLDLK
Sbjct: 59  LPCHWEQCLDLK 70


>ref|NP_001189667.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330253753|gb|AEC08847.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 204

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +2

Query: 38  MEAPDMASIT-ALERSLQNCSLNNRTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXXHVS 214
           M+AP+M +IT +LE+S+ NCSLN+R R   G G  RS                    H+S
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSS--SNEHMTPISDRTLELNSHLS 58

Query: 215 LPYHWEQCLDLK 250
           LP HWEQCLDLK
Sbjct: 59  LPCHWEQCLDLK 70


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