BLASTX nr result

ID: Coptis21_contig00016625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016625
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283859.1| PREDICTED: uncharacterized protein LOC100252...   337   6e-90
ref|XP_003592234.1| hypothetical protein MTR_1g100570 [Medicago ...   332   1e-88
ref|XP_002307540.1| predicted protein [Populus trichocarpa] gi|2...   329   9e-88
gb|AFN88203.1| haloacid dehalogenase superfamily protein [Phaseo...   327   3e-87
ref|XP_002300885.1| predicted protein [Populus trichocarpa] gi|2...   327   3e-87

>ref|XP_002283859.1| PREDICTED: uncharacterized protein LOC100252338 [Vitis vinifera]
          Length = 344

 Score =  337 bits (863), Expect = 6e-90
 Identities = 170/275 (61%), Positives = 204/275 (74%)
 Frame = +3

Query: 258  HFHETKDLILTEMYSFLDNNNTNNKTQAQEPFEQKHTALTQTNVHSGNSSNMWWNNIKAA 437
            H     ++ L E+YS  +N N +  TQ  +P E+K       N      +NMWW ++KAA
Sbjct: 77   HTPSQTNIFLHELYSSTENFNQSKTTQ--DPEERK------INSSRVIFTNMWWADLKAA 128

Query: 438  LSQRFNFEGISSALAVMTKDNHLAVPHISVKDIRWIDWVELEKRGFKGVVFDKDNTLTLP 617
            L QRFNFEGI  +  V+ KD HLA+PH++V DIR+IDW EL +RGFKGVVFDKDNTLT P
Sbjct: 129  LGQRFNFEGIICSAVVLAKDRHLALPHVAVPDIRYIDWAELHRRGFKGVVFDKDNTLTKP 188

Query: 618  YSLVLWPPLEASLDSCKSVFGDNVAVFSNSAGLSQYDANGSKARTLEQSIGIHVIRHGVK 797
            YSL LW P+ +SL  CKSVFG ++ VFSNSAGL +YD +GSKAR LE +IGI VIRH VK
Sbjct: 189  YSLTLWEPIGSSLQQCKSVFGHDIGVFSNSAGLYEYDPDGSKARVLEGAIGIEVIRHRVK 248

Query: 798  KPGGSGEDIEKYFGCEASLLIMVGDRYFTDIVYGNRNGFLTILTQPLSLVEEPFVVKQVR 977
            KP G+ E+IEK+FGC +SLLIMVGDR FTDIV+GNRNGFLTILT+PLSL EEPF+VKQVR
Sbjct: 249  KPAGTAEEIEKHFGCASSLLIMVGDRPFTDIVFGNRNGFLTILTEPLSLAEEPFLVKQVR 308

Query: 978  KLEASLANYWNRRGLKPVCHSLLSEVVHCVKVPPP 1082
            KLEA + N   +RGLKP  HSLL +   CVK PPP
Sbjct: 309  KLEAFVVNRCYKRGLKPTNHSLLPDAQECVKNPPP 343


>ref|XP_003592234.1| hypothetical protein MTR_1g100570 [Medicago truncatula]
            gi|357462099|ref|XP_003601331.1| hypothetical protein
            MTR_3g079530 [Medicago truncatula]
            gi|355481282|gb|AES62485.1| hypothetical protein
            MTR_1g100570 [Medicago truncatula]
            gi|355490379|gb|AES71582.1| hypothetical protein
            MTR_3g079530 [Medicago truncatula]
          Length = 352

 Score =  332 bits (851), Expect = 1e-88
 Identities = 164/273 (60%), Positives = 200/273 (73%), Gaps = 4/273 (1%)
 Frame = +3

Query: 273  KDLILTEMYSFLDNNNTNNKTQAQEPFEQKHT----ALTQTNVHSGNSSNMWWNNIKAAL 440
            K L L + +S  D+ +T+N+        Q+         +    S   + MWW ++KAA 
Sbjct: 78   KHLFLIKYFSLADSEDTSNQNPETRNHSQRQPDRQREFKEHKKDSALFTKMWWADLKAAF 137

Query: 441  SQRFNFEGISSALAVMTKDNHLAVPHISVKDIRWIDWVELEKRGFKGVVFDKDNTLTLPY 620
             QR NFEGI  +  V+ KD  L++PHISV DIR+IDW  L ++GFKGVVFDKDNT+T+PY
Sbjct: 138  GQRINFEGILCSTMVILKDPKLSLPHISVPDIRYIDWAALHRKGFKGVVFDKDNTITVPY 197

Query: 621  SLVLWPPLEASLDSCKSVFGDNVAVFSNSAGLSQYDANGSKARTLEQSIGIHVIRHGVKK 800
            SL  WPPLE+SL+SCKS FG ++AVFSNSAGL +YD +GSKAR LE +IGI VIRH VKK
Sbjct: 198  SLTPWPPLESSLESCKSEFGQDIAVFSNSAGLREYDHDGSKARNLEGTIGIKVIRHRVKK 257

Query: 801  PGGSGEDIEKYFGCEASLLIMVGDRYFTDIVYGNRNGFLTILTQPLSLVEEPFVVKQVRK 980
            PGG+ E+IEK+FGCEAS LIMVGDR FTDIVYGNRNGFLTI T+PLSL EEPF+VKQVRK
Sbjct: 258  PGGTAEEIEKHFGCEASELIMVGDRPFTDIVYGNRNGFLTIWTEPLSLAEEPFIVKQVRK 317

Query: 981  LEASLANYWNRRGLKPVCHSLLSEVVHCVKVPP 1079
            LE +   YW+RRGLKP+   LL +  HCVK PP
Sbjct: 318  LETTFVKYWSRRGLKPLDQKLLPDPRHCVKEPP 350


>ref|XP_002307540.1| predicted protein [Populus trichocarpa] gi|222856989|gb|EEE94536.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  329 bits (844), Expect = 9e-88
 Identities = 148/224 (66%), Positives = 190/224 (84%)
 Frame = +3

Query: 411  MWWNNIKAALSQRFNFEGISSALAVMTKDNHLAVPHISVKDIRWIDWVELEKRGFKGVVF 590
            MWW +++A  SQR N EGI S+ +V+ KD H+A+PH+ V DIR+IDW EL++RGFKGVVF
Sbjct: 1    MWWKDLRATFSQRINVEGIGSSASVLVKDQHMALPHVLVPDIRYIDWGELQRRGFKGVVF 60

Query: 591  DKDNTLTLPYSLVLWPPLEASLDSCKSVFGDNVAVFSNSAGLSQYDANGSKARTLEQSIG 770
            DKDNT+T+PYSL +W PL+AS++ CKSVFG+++AVFSNSAGL +YD + SKAR LE++IG
Sbjct: 61   DKDNTITVPYSLTIWDPLDASIERCKSVFGNDIAVFSNSAGLFEYDHDDSKARALEKAIG 120

Query: 771  IHVIRHGVKKPGGSGEDIEKYFGCEASLLIMVGDRYFTDIVYGNRNGFLTILTQPLSLVE 950
            I VIRH VKKP G+ E+IEK+FGC++S L+MVGDR FTDIVYGN+NGFLT+LT+PLSL E
Sbjct: 121  IKVIRHRVKKPAGTAEEIEKHFGCKSSQLVMVGDRPFTDIVYGNQNGFLTVLTKPLSLAE 180

Query: 951  EPFVVKQVRKLEASLANYWNRRGLKPVCHSLLSEVVHCVKVPPP 1082
            EPF+V+QVRKLE SL NYW +RG+KP+ H+LL + + CVK PPP
Sbjct: 181  EPFIVRQVRKLEMSLMNYWLKRGMKPISHNLLPDAMECVKDPPP 224


>gb|AFN88203.1| haloacid dehalogenase superfamily protein [Phaseolus vulgaris]
          Length = 354

 Score =  327 bits (839), Expect = 3e-87
 Identities = 163/258 (63%), Positives = 193/258 (74%)
 Frame = +3

Query: 309  DNNNTNNKTQAQEPFEQKHTALTQTNVHSGNSSNMWWNNIKAALSQRFNFEGISSALAVM 488
            D NN N +T+     +       + N  +   +NMWW ++KAAL QR N EGI  +  V+
Sbjct: 97   DTNNQNLRTRNHYQHQVDKQGEFKENNKARPFTNMWWVDVKAALGQRINLEGIICSTMVI 156

Query: 489  TKDNHLAVPHISVKDIRWIDWVELEKRGFKGVVFDKDNTLTLPYSLVLWPPLEASLDSCK 668
             KD  LA+PHISV DIR++DW EL ++GFKGVVFDKDNTLT PYSL  WPPLE+SL+SCK
Sbjct: 157  LKDPKLAMPHISVPDIRYVDWAELRRKGFKGVVFDKDNTLTAPYSLKPWPPLESSLESCK 216

Query: 669  SVFGDNVAVFSNSAGLSQYDANGSKARTLEQSIGIHVIRHGVKKPGGSGEDIEKYFGCEA 848
              FG ++AVFSNSAGL +YD +GSKAR LE +IGI VIRH VKKP G+ E+IEK+FGCEA
Sbjct: 217  LEFGHDIAVFSNSAGLHEYDHDGSKARMLEGAIGIKVIRHRVKKPAGTAEEIEKHFGCEA 276

Query: 849  SLLIMVGDRYFTDIVYGNRNGFLTILTQPLSLVEEPFVVKQVRKLEASLANYWNRRGLKP 1028
            S LIMVGDR FTDIVYGNRNGFLTILT+P SLVEEPF+VKQVRKLE S   YW+RRGLKP
Sbjct: 277  SRLIMVGDRPFTDIVYGNRNGFLTILTEPFSLVEEPFIVKQVRKLETSFVRYWSRRGLKP 336

Query: 1029 VCHSLLSEVVHCVKVPPP 1082
            +   LL +   CVK P P
Sbjct: 337  LGQKLLPDPKPCVKEPYP 354


>ref|XP_002300885.1| predicted protein [Populus trichocarpa] gi|222842611|gb|EEE80158.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  327 bits (839), Expect = 3e-87
 Identities = 152/224 (67%), Positives = 186/224 (83%)
 Frame = +3

Query: 411  MWWNNIKAALSQRFNFEGISSALAVMTKDNHLAVPHISVKDIRWIDWVELEKRGFKGVVF 590
            MWW +++AAL QR N EGI S+ +V  KD HLA+PH+ V DIR+IDW  L+ RGFKGVVF
Sbjct: 1    MWWTDLRAALGQRINVEGIVSSASVFVKDRHLALPHVVVPDIRYIDWGGLQARGFKGVVF 60

Query: 591  DKDNTLTLPYSLVLWPPLEASLDSCKSVFGDNVAVFSNSAGLSQYDANGSKARTLEQSIG 770
            DKDNT+T+PYSL LW PL  S++ CKSVFG+++AVFSNSAGL +YD +GSKAR LE++IG
Sbjct: 61   DKDNTITVPYSLTLWGPLSPSIERCKSVFGNDIAVFSNSAGLFEYDHDGSKARALEKAIG 120

Query: 771  IHVIRHGVKKPGGSGEDIEKYFGCEASLLIMVGDRYFTDIVYGNRNGFLTILTQPLSLVE 950
            I VIRH VKKP G+ E+IEK+FGC++S LIMVGDR FTDIVYGNRNGFLT+LT+PLSL E
Sbjct: 121  IKVIRHRVKKPAGTSEEIEKHFGCKSSQLIMVGDRPFTDIVYGNRNGFLTVLTKPLSLAE 180

Query: 951  EPFVVKQVRKLEASLANYWNRRGLKPVCHSLLSEVVHCVKVPPP 1082
            EPF+V+QVRKLE SL  YW +RGLKP+ H+LL + + CVK PPP
Sbjct: 181  EPFIVRQVRKLETSLMGYWFKRGLKPISHNLLPDAMQCVKDPPP 224


Top