BLASTX nr result

ID: Coptis21_contig00016607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016607
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275498.1| PREDICTED: GATA transcription factor 16 [Vit...    65   4e-09
gb|AFW82513.1| putative GATA transcription factor family protein...    59   4e-07
ref|XP_004134235.1| PREDICTED: GATA transcription factor 16-like...    58   7e-07
ref|XP_004134234.1| PREDICTED: GATA transcription factor 16-like...    58   7e-07
emb|CBI36080.3| unnamed protein product [Vitis vinifera]               57   1e-06

>ref|XP_002275498.1| PREDICTED: GATA transcription factor 16 [Vitis vinifera]
           gi|296083288|emb|CBI22924.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/55 (52%), Positives = 38/55 (69%)
 Frame = +1

Query: 205 EEASGSEDMDKKHPCVPSSEDTQSQGRERVCLNCKTTNTPQWRWGPAGPKTLCNA 369
           E+ S SEDM+ K+P   SS ++Q    ++ C +C TT TP WR GPAGPK+LCNA
Sbjct: 6   EKGSESEDMNNKNPDAVSSAESQVNEPKKTCADCGTTKTPLWRGGPAGPKSLCNA 60


>gb|AFW82513.1| putative GATA transcription factor family protein [Zea mays]
          Length = 384

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +1

Query: 235 KKHPCVPSSEDTQSQGRERVCLNCKTTNTPQWRWGPAGPKTLCNA 369
           K+ P  P  +++   G  R CL+C+T  TPQWR GP GPKTLCNA
Sbjct: 230 KEAPTTPVPDNSAGAGESRRCLHCETDKTPQWRTGPLGPKTLCNA 274


>ref|XP_004134235.1| PREDICTED: GATA transcription factor 16-like isoform 2 [Cucumis
           sativus]
          Length = 148

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +1

Query: 205 EEASGSEDMDKKHPCVPSSEDTQ-SQGRERVCLNCKTTNTPQWRWGPAGPKTLCNA 369
           +  S SEDM  K+    SSE++Q ++  ++ C +C T+ TP WR GPAGPK+LCNA
Sbjct: 7   DRGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNA 62


>ref|XP_004134234.1| PREDICTED: GATA transcription factor 16-like isoform 1 [Cucumis
           sativus]
          Length = 151

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/55 (49%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = +1

Query: 208 EASGSEDMDKKHPCVPSSEDTQ-SQGRERVCLNCKTTNTPQWRWGPAGPKTLCNA 369
           + S SEDM  K+    SSE++Q ++  ++ C +C T+ TP WR GPAGPK+LCNA
Sbjct: 11  QGSESEDMSGKNSSGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNA 65


>emb|CBI36080.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/56 (51%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
 Frame = +1

Query: 211 ASGSEDMDKKHPCVPSS---EDTQSQGRERVCLNCKTTNTPQWRWGPAGPKTLCNA 369
           +S   D  KK P   SS   E++ S G  R CL+C    TPQWR GP GPKTLCNA
Sbjct: 148 SSSESDAFKKPPKTTSSKKKENSDSAGDGRKCLHCAAEKTPQWRTGPMGPKTLCNA 203


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