BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016586
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   234   9e-60
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   234   2e-59
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   231   1e-58
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   224   9e-57
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   220   2e-55

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  234 bits (598), Expect = 9e-60
 Identities = 111/224 (49%), Positives = 161/224 (71%)
 Frame = +1

Query: 7    SDSDIWSTVKKMGALKAPGPDGFQGIFFHKYWDIIGPDISLAVKEFFIYGKLSPCLNESF 186
            +D ++   V  +GA +APG DGF   F+H  WD+IG D+ L V+ FF    +   +N++ 
Sbjct: 791  TDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQ 850

Query: 187  ITLIPKIPNPEHISKFRPISLCNFSYKIISKILASRLKTLLHKIISPMQGAFVKGRSIGD 366
            I LIPKI +P+H+S +RPISLC  SYKIISKIL  RLK  L  +IS  Q AFV G++I D
Sbjct: 851  ICLIPKIIDPKHMSDYRPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISD 910

Query: 367  NIGLASEIMYRMRKIKKQKQGWMAVKLDMAKAFDRVEWSFVDQIMEKLGFSVKWRRLIQQ 546
            N+ +A E+++ ++  ++ + G++AVK D++KA+DRVEW+F++++M +LGF+ +W + I  
Sbjct: 911  NVLVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMT 970

Query: 547  CLSTVSYNVLLNGSPLEKVFPERGIRQGDPLSPYLFIMVAEAFS 678
            C+++VSY VL+NGSP  K+FP RGIRQGDPLSPYLF+  AE  S
Sbjct: 971  CVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLS 1014


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  234 bits (596), Expect = 2e-59
 Identities = 112/221 (50%), Positives = 153/221 (69%)
 Frame = +1

Query: 16   DIWSTVKKMGALKAPGPDGFQGIFFHKYWDIIGPDISLAVKEFFIYGKLSPCLNESFITL 195
            +I   +  + A KAPGPDGF   FFH YWDII  D+S  ++ FF+   LSP LNE+ +TL
Sbjct: 373  EIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTL 432

Query: 196  IPKIPNPEHISKFRPISLCNFSYKIISKILASRLKTLLHKIISPMQGAFVKGRSIGDNIG 375
            IPKI  P  +S +RPI+LCN  YKI++KIL  RL+  L ++IS  Q AFV GR+I DN+ 
Sbjct: 433  IPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVL 492

Query: 376  LASEIMYRMRKIKKQKQGWMAVKLDMAKAFDRVEWSFVDQIMEKLGFSVKWRRLIQQCLS 555
            +  EI++ +R    +K   MA+K DM+KA+DR++W+F+ +++ +LGF  KW R + QC+ 
Sbjct: 493  ITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVC 552

Query: 556  TVSYNVLLNGSPLEKVFPERGIRQGDPLSPYLFIMVAEAFS 678
            TVSY+ L+NGSP   V P RG+RQGDPLSPYLFI+  E  S
Sbjct: 553  TVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLS 593


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  231 bits (589), Expect = 1e-58
 Identities = 110/221 (49%), Positives = 152/221 (68%)
 Frame = +1

Query: 16  DIWSTVKKMGALKAPGPDGFQGIFFHKYWDIIGPDISLAVKEFFIYGKLSPCLNESFITL 195
           +IW+ +  +G LKAPG DG   IF+ K+W ++G  +   V      G +    N++ I L
Sbjct: 13  EIWNALDNIGDLKAPGADGIPSIFYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVL 72

Query: 196 IPKIPNPEHISKFRPISLCNFSYKIISKILASRLKTLLHKIISPMQGAFVKGRSIGDNIG 375
           IPK   P+ +   RPISLCN  YK+ISK+LA+RLK +L  IIS  Q AFV GR I DN+ 
Sbjct: 73  IPKTNTPQMLKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVL 132

Query: 376 LASEIMYRMRKIKKQKQGWMAVKLDMAKAFDRVEWSFVDQIMEKLGFSVKWRRLIQQCLS 555
           LA EI++ ++ IKK   G  A+KLDM+KA+DRVEWSF++ +M K+GF  KW +LI +C++
Sbjct: 133 LAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVT 192

Query: 556 TVSYNVLLNGSPLEKVFPERGIRQGDPLSPYLFIMVAEAFS 678
           TV+Y + +N S  +K+FP+RG+RQGDPLSPYLFI+ AE  S
Sbjct: 193 TVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLS 233


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  224 bits (572), Expect = 9e-57
 Identities = 111/221 (50%), Positives = 151/221 (68%)
 Frame = +1

Query: 7    SDSDIWSTVKKMGALKAPGPDGFQGIFFHKYWDIIGPDISLAVKEFFIYGKLSPCLNESF 186
            S  +I + V  +   K+PGPDGF   FF KYW +IG  +  AV+ FF  G +   +N +F
Sbjct: 445  SPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTF 504

Query: 187  ITLIPKIPNPEHISKFRPISLCNFSYKIISKILASRLKTLLHKIISPMQGAFVKGRSIGD 366
            + LIPK+  P + + FRPISLC+  YK+ISKI+ +RLK  L KII P+QGAF+  R I D
Sbjct: 505  LALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGAFIPERLIQD 564

Query: 367  NIGLASEIMYRMRKIKKQKQGWMAVKLDMAKAFDRVEWSFVDQIMEKLGFSVKWRRLIQQ 546
            NI +A E+ +   K K  + GW+A+KLDM KA+DR+EW ++   M+K+GFS  W   I+ 
Sbjct: 565  NILIAHEVFHSF-KNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRS 623

Query: 547  CLSTVSYNVLLNGSPLEKVFPERGIRQGDPLSPYLFIMVAE 669
            C+S+ S++VL+NG P E+ FP RGIRQGDPLSPYLFI+ AE
Sbjct: 624  CISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILCAE 664


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  220 bits (560), Expect = 2e-55
 Identities = 109/221 (49%), Positives = 145/221 (65%)
 Frame = +1

Query: 16   DIWSTVKKMGALKAPGPDGFQGIFFHKYWDIIGPDISLAVKEFFIYGKLSPCLNESFITL 195
            ++   +  +G LKAPGPDG    F+   WD++G  ++  V E    G +    N+  I L
Sbjct: 661  EVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVL 720

Query: 196  IPKIPNPEHISKFRPISLCNFSYKIISKILASRLKTLLHKIISPMQGAFVKGRSIGDNIG 375
            IPK+  PE I   RPISLCN  YK++SK+LA+RLK +L  +ISP Q AFV GR I DNI 
Sbjct: 721  IPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNIL 780

Query: 376  LASEIMYRMRKIKKQKQGWMAVKLDMAKAFDRVEWSFVDQIMEKLGFSVKWRRLIQQCLS 555
            +A E+ + MR  +  + G+ A KLDM+KA+DRVEWSF+  +M KLGF   W  LI +C+S
Sbjct: 781  IADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDWVNLIMKCVS 840

Query: 556  TVSYNVLLNGSPLEKVFPERGIRQGDPLSPYLFIMVAEAFS 678
            TV+Y + +NG   E   PERG+RQGDPLSPYLF++ AE FS
Sbjct: 841  TVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFS 881