BLASTX nr result

ID: Coptis21_contig00016583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016583
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90715.1| nucleotide-binding site leucine-rich repeat prote...   202   1e-49
gb|AFC90785.1| nucleotide-binding site leucine-rich repeat prote...   201   2e-49
gb|AFC90763.1| nucleotide-binding site leucine-rich repeat prote...   201   3e-49
gb|AFC90794.1| nucleotide-binding site leucine-rich repeat prote...   200   4e-49
gb|AFC90634.1| nucleotide-binding site leucine-rich repeat prote...   200   4e-49

>gb|AFC90715.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  202 bits (514), Expect = 1e-49
 Identities = 111/249 (44%), Positives = 153/249 (61%), Gaps = 3/249 (1%)
 Frame = -3

Query: 839 FDRIIWVTVSKVLSLDDVQNEIAKQLNASLPVDLAEVRRASML-SDMXXXXXXXXXLDDV 663
           FD + WVTVSK   + ++Q++IAK LN SL  D    RRAS L + +         LDDV
Sbjct: 19  FDIVYWVTVSKAFDITNLQSDIAKSLNLSLWEDEEVTRRASQLYATLSRQKRYILILDDV 78

Query: 662 WEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEEAWDLFVSKA- 486
           WEP  LEKVG+P+P   NGCK+VLTTRS +VC  M     + +  L++EEA  LF++KA 
Sbjct: 79  WEPFALEKVGIPEPIRSNGCKLVLTTRSLEVCRRMECTP-VKVDLLTEEEALTLFLTKAV 137

Query: 485 -GDKVLTPDIRPIASKVAGECLSHPLVIITVGHALRECSSFKKWENALSALRSSKTKIED 309
             D VL P++  IA+K+A EC   PL I+T+  +LR     ++W NAL+ L SS     D
Sbjct: 138 GHDTVLAPEVEEIAAKIAKECACLPLAIVTLAGSLRGLKGIREWRNALNELISSAKDASD 197

Query: 308 PEEVIYKLLRLGYSCLKNHMVQQCFLYCAFFPEDYLFEPNELIRYWMAEDLINEVGGMVS 129
            E  +++ L+  YS L N ++Q CFLYC+ +PED+    NELI YW+AE LI E+  + +
Sbjct: 198 DESEVFERLKFSYSRLGNKVLQDCFLYCSLYPEDHDIPVNELIEYWIAEGLIAEMNSIEA 257

Query: 128 EIYEGFKIL 102
            I +G  IL
Sbjct: 258 MINKGHAIL 266


>gb|AFC90785.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  201 bits (512), Expect = 2e-49
 Identities = 110/249 (44%), Positives = 153/249 (61%), Gaps = 3/249 (1%)
 Frame = -3

Query: 839 FDRIIWVTVSKVLSLDDVQNEIAKQLNASLPVDLAEVRRASML-SDMXXXXXXXXXLDDV 663
           FD + WVTVSK   + ++Q++IAK LN SL  D    RRAS L + +         LDDV
Sbjct: 19  FDIVYWVTVSKAFDITNLQSDIAKSLNLSLWEDEEVTRRASQLYATLSRQKRYILILDDV 78

Query: 662 WEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEEAWDLFVSKA- 486
           WEP  LEKVG+P+P   NGCK+VLTTRS +VC  M     + +  L++EEA  LF++KA 
Sbjct: 79  WEPFALEKVGIPEPIRSNGCKLVLTTRSLEVCRRMECTP-VKVDLLTEEEALTLFLTKAV 137

Query: 485 -GDKVLTPDIRPIASKVAGECLSHPLVIITVGHALRECSSFKKWENALSALRSSKTKIED 309
             D VL P++  IA+K+A EC   PL I+T+  +LR     ++W NAL+ L SS     D
Sbjct: 138 GHDTVLAPEVEEIAAKIAKECACLPLAIVTLAGSLRGLKGIREWRNALNELISSTKDASD 197

Query: 308 PEEVIYKLLRLGYSCLKNHMVQQCFLYCAFFPEDYLFEPNELIRYWMAEDLINEVGGMVS 129
            E  +++ L+  YS L N ++Q CFLYC+ +PED+    NELI YW+AE LI E+  + +
Sbjct: 198 DESEVFERLKFSYSRLGNKVLQDCFLYCSLYPEDHDIPVNELIEYWIAEGLIAEMNSIEA 257

Query: 128 EIYEGFKIL 102
            + +G  IL
Sbjct: 258 MLNKGHAIL 266


>gb|AFC90763.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  201 bits (510), Expect = 3e-49
 Identities = 110/249 (44%), Positives = 153/249 (61%), Gaps = 3/249 (1%)
 Frame = -3

Query: 839 FDRIIWVTVSKVLSLDDVQNEIAKQLNASLPVDLAEVRRASML-SDMXXXXXXXXXLDDV 663
           FD + WVTVSK   + ++Q++IAK LN SL  D    RRAS L + +         LDDV
Sbjct: 19  FDIVYWVTVSKAFDITNLQSDIAKSLNLSLWEDEEVTRRASQLYATLSRQKRYILILDDV 78

Query: 662 WEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEEAWDLFVSKA- 486
           WEP  LEKVG+P+P   NGCK+VLTTRS +VC  M     + +  L++EEA  LF++KA 
Sbjct: 79  WEPFALEKVGIPEPIRSNGCKLVLTTRSLEVCRRMECTP-VKVDLLTEEEALTLFLTKAV 137

Query: 485 -GDKVLTPDIRPIASKVAGECLSHPLVIITVGHALRECSSFKKWENALSALRSSKTKIED 309
             D VL P++  IA+K+A EC   PL I+T+  +LR     ++W NAL+ L SS     D
Sbjct: 138 GHDTVLAPEVEEIAAKIAKECACLPLAIVTLAGSLRGLKGIREWRNALNELISSTKDASD 197

Query: 308 PEEVIYKLLRLGYSCLKNHMVQQCFLYCAFFPEDYLFEPNELIRYWMAEDLINEVGGMVS 129
            E  +++ L+  YS L N ++Q CFLYC+ +PED+    NELI YW+AE LI E+  + +
Sbjct: 198 DESEVFERLKFSYSRLGNKVLQDCFLYCSLYPEDHDIPVNELIEYWIAEGLIAEMNSIEA 257

Query: 128 EIYEGFKIL 102
            + +G  IL
Sbjct: 258 MMDKGHAIL 266


>gb|AFC90794.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  200 bits (509), Expect = 4e-49
 Identities = 108/249 (43%), Positives = 153/249 (61%), Gaps = 3/249 (1%)
 Frame = -3

Query: 839 FDRIIWVTVSKVLSLDDVQNEIAKQLNASLPVDLAEVRRASML-SDMXXXXXXXXXLDDV 663
           FD + WVTVSK   + ++Q++IAK LN  L  D  E +RAS L + +         LDDV
Sbjct: 19  FDNVNWVTVSKAFDITNLQSDIAKSLNLPLREDEEETKRASQLYATLSRQKRYVLILDDV 78

Query: 662 WEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEEAWDLFVSKA- 486
           WEP  LEKVG+P+P   NGCK+VLTTRS +VC  M     + +  L++EEA  LF++KA 
Sbjct: 79  WEPFALEKVGIPEPIRSNGCKLVLTTRSLEVCRRMECTP-VKVDLLTEEEALTLFLTKAV 137

Query: 485 -GDKVLTPDIRPIASKVAGECLSHPLVIITVGHALRECSSFKKWENALSALRSSKTKIED 309
             D VL P++  IA+K+A EC   PL I+T+  +LR     ++W NAL+ L SS     D
Sbjct: 138 GHDTVLAPEVEEIAAKIAKECACLPLAIVTLAGSLRGLKGIREWRNALNELISSTKDASD 197

Query: 308 PEEVIYKLLRLGYSCLKNHMVQQCFLYCAFFPEDYLFEPNELIRYWMAEDLINEVGGMVS 129
            E  +++ L+  YS L N ++Q CFLYC+ + ED+    NELI YW+AE LI E+  + +
Sbjct: 198 DESEVFERLKFSYSRLGNKVLQDCFLYCSLYSEDHNIPVNELIEYWIAEGLIAEMNSVEA 257

Query: 128 EIYEGFKIL 102
           ++ +G  IL
Sbjct: 258 KMNKGHAIL 266


>gb|AFC90634.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  200 bits (509), Expect = 4e-49
 Identities = 111/249 (44%), Positives = 152/249 (61%), Gaps = 3/249 (1%)
 Frame = -3

Query: 839 FDRIIWVTVSKVLSLDDVQNEIAKQLNASLPVDLAEVRRASML-SDMXXXXXXXXXLDDV 663
           FD + WVTVSK   + ++Q++IAK LN SL  D    RRAS L + +         LDDV
Sbjct: 19  FDIVYWVTVSKAFDITNLQSDIAKSLNLSLWEDEEVTRRASQLYATLSRQKRYILILDDV 78

Query: 662 WEPIPLEKVGVPQPTMENGCKVVLTTRSEKVCHCMSTDKNIHIGGLSDEEAWDLFVSKA- 486
           WEP  LEKVG+P+P   NGCK+VLTTRS +VC  M     + +  L++EEA  LF++KA 
Sbjct: 79  WEPFALEKVGIPEPIRSNGCKLVLTTRSLEVCRRMECTP-VKVDLLTEEEALTLFLTKAV 137

Query: 485 -GDKVLTPDIRPIASKVAGECLSHPLVIITVGHALRECSSFKKWENALSALRSSKTKIED 309
             D VL P++  IA+K A EC   PL I+T+  +LR     ++W NAL+ L SS     D
Sbjct: 138 GHDTVLAPEVEEIAAKFAKECACLPLAIVTLAGSLRGLKGIREWRNALNELISSTKDASD 197

Query: 308 PEEVIYKLLRLGYSCLKNHMVQQCFLYCAFFPEDYLFEPNELIRYWMAEDLINEVGGMVS 129
            E  +++ L+  YS L N ++Q CFLYC+ +PED+    NELI YW+AE LI E+  + +
Sbjct: 198 DESEVFERLKFSYSRLGNKVLQDCFLYCSLYPEDHDIPVNELIEYWIAEGLIAEMNSIEA 257

Query: 128 EIYEGFKIL 102
            I +G  IL
Sbjct: 258 MIDKGHAIL 266