BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016582
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   547   e-153
ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   543   e-152
emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]   543   e-152
ref|XP_004138587.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   537   e-150
ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative...   533   e-149

>ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Cucumis sativus]
          Length = 795

 Score =  547 bits (1409), Expect = e-153
 Identities = 288/504 (57%), Positives = 354/504 (70%), Gaps = 11/504 (2%)
 Frame = -1

Query: 1480 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPVSI 1301
            M +G AT+L R +SS+++ SR R+   N+ LH + Q     + + + +  FST  + V  
Sbjct: 1    MFRGPATTLLRISSSRKSASRFRIFTGNRLLHSVGQYDDHKILQSNPVRPFSTTVNQVWF 60

Query: 1300 NGIC-RDRGRLLSSSFYALGQKGYSNSSKCLDFGHVSTQLCRVSTKLVNLDGVRFRKGFN 1124
              +  R R  + SS             +   D   VS      S+ +V + G     G N
Sbjct: 61   RLLSQRSRFGVFSSFNLRRISIPVGPEADNKDGNGVS------SSNVVEVGGYDADVGKN 114

Query: 1123 LVQLNWFXXXXXXXXXXXXXXXXXXXXXXEGSDGDSSKNVDS---------FDHVASRDP 971
            +   N                         GS  D SKN DS         ++ + S DP
Sbjct: 115  VCFEN--------DSMMVTGEDGCIGDSIRGSIVDDSKNGDSDLRSSKLRNYETIKSCDP 166

Query: 970  VEFYGELKSIETGVKRTQ-KDWDTLVEIFQSFARSGWASDRSLAIYIGALFFPTAVQKFR 794
            VE Y EL+S+E G  + +  DW  L EIF  F  SGWAS+++L IYIG  FFPTAV KFR
Sbjct: 167  VELYSELRSVEMGGSKVELSDWLILQEIFHYFLHSGWASNQALGIYIGMSFFPTAVSKFR 226

Query: 793  SFFIKRCPNDVAKYLVSVGPSEESEQFLFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPH 614
            +FF+K+C  DV KYLV +GPS+++ +FLFPIF E+CL +FP+EIK F+ +V SADLTKPH
Sbjct: 227  NFFLKKCSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLVEFPDEIKRFQSMVKSADLTKPH 286

Query: 613  TWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKGIYCGPLRLLAMEIFDKVNSLGV 434
            TWFPFARAMKRKI+YHCGPTNSGKT+NALQRFMEAKKGIYC PLRLLAME+FDKVN+ GV
Sbjct: 287  TWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGV 346

Query: 433  YCSLLTGQEKKRVPFANHVACTVEMVSTDEVYEVAILDEIQMMADPCRGYAWTRALLGLK 254
            YCSLLTGQEKK +PF++H+ACTVEMVST+++YE+A++DEIQMM+DPCRGYAWTRALLGLK
Sbjct: 347  YCSLLTGQEKKLLPFSSHIACTVEMVSTEDLYEIAVIDEIQMMSDPCRGYAWTRALLGLK 406

Query: 253  ADEVHLCGDPSVLEIVRKICAETGDELVENHYQRFKPLVVEAKTLLGDLRNVRPGDCVVA 74
            ADE+HLCGDPSVL +VRKIC+ETGDEL E HY+RFKPLVVEAKTLLGD +NVR GDC+VA
Sbjct: 407  ADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDFKNVRSGDCIVA 466

Query: 73   FSRREIFEVKLAIEKYTKHRCCVI 2
            FSRREIFEVKLAIEK+TKHRCCVI
Sbjct: 467  FSRREIFEVKLAIEKFTKHRCCVI 490


>ref|XP_003633851.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Vitis vinifera]
          Length = 806

 Score =  543 bits (1398), Expect = e-152
 Identities = 254/346 (73%), Positives = 297/346 (85%), Gaps = 5/346 (1%)
 Frame = -1

Query: 1024 GDSSKNVDS-----FDHVASRDPVEFYGELKSIETGVKRTQKDWDTLVEIFQSFARSGWA 860
            G+SS +V S     ++HVA RDP E Y EL   +T  K T+ DW+ + EI   F +SGWA
Sbjct: 135  GNSSDDVGSGESVGYEHVAYRDPAELYRELCDSQTSAKPTKSDWEMVSEILHHFRKSGWA 194

Query: 859  SDRSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESEQFLFPIFAEFCLE 680
            ++++LAIYIG  FFPTA  KFRSF  K+C  DVAKYL S+GP + + +FLFPIF EFCLE
Sbjct: 195  ANQALAIYIGMSFFPTAASKFRSFMSKKCTADVAKYLASLGPGDAAVKFLFPIFVEFCLE 254

Query: 679  KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 500
            +FP+EIK FR ++ SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQR+MEAKKG
Sbjct: 255  EFPDEIKRFRSMIKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRYMEAKKG 314

Query: 499  IYCGPLRLLAMEIFDKVNSLGVYCSLLTGQEKKRVPFANHVACTVEMVSTDEVYEVAILD 320
            IYC PLRLLAME+FDKVN+LG+YCSL TGQEKK VPF+NH +CTVEMVSTD++Y+VA++D
Sbjct: 315  IYCSPLRLLAMEVFDKVNALGIYCSLHTGQEKKNVPFSNHTSCTVEMVSTDDIYDVAVID 374

Query: 319  EIQMMADPCRGYAWTRALLGLKADEVHLCGDPSVLEIVRKICAETGDELVENHYQRFKPL 140
            EIQMM+DPCRGYAWTRALLGLKADE+HLCGDPSVL +VRKIC+ETGDEL E HY+RFKPL
Sbjct: 375  EIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELFEQHYERFKPL 434

Query: 139  VVEAKTLLGDLRNVRPGDCVVAFSRREIFEVKLAIEKYTKHRCCVI 2
            VVEAKTLLG+L+NVR GDCVVAFSRREIFEVKLAIEK+T HRCCVI
Sbjct: 435  VVEAKTLLGELQNVRSGDCVVAFSRREIFEVKLAIEKHTNHRCCVI 480


>emb|CAN60906.1| hypothetical protein VITISV_028450 [Vitis vinifera]
          Length = 906

 Score =  543 bits (1398), Expect = e-152
 Identities = 254/346 (73%), Positives = 297/346 (85%), Gaps = 5/346 (1%)
 Frame = -1

Query: 1024 GDSSKNVDS-----FDHVASRDPVEFYGELKSIETGVKRTQKDWDTLVEIFQSFARSGWA 860
            G+SS +V S     ++HVA RDP E Y EL   +T  K T+ DW+ + EI   F +SGWA
Sbjct: 182  GNSSDDVGSGESVGYEHVAYRDPAELYRELCDSQTSAKPTKSDWEMVSEILHHFRKSGWA 241

Query: 859  SDRSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESEQFLFPIFAEFCLE 680
            ++++LAIYIG  FFPTA  KFRSF  K+C  DVAKYL S+GP + + +FLFPIF EFCLE
Sbjct: 242  ANQALAIYIGMSFFPTAASKFRSFMSKKCTADVAKYLASLGPGDAAVKFLFPIFVEFCLE 301

Query: 679  KFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKG 500
            +FP+EIK FR ++ SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQR+MEAKKG
Sbjct: 302  EFPDEIKRFRSMIKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRYMEAKKG 361

Query: 499  IYCGPLRLLAMEIFDKVNSLGVYCSLLTGQEKKRVPFANHVACTVEMVSTDEVYEVAILD 320
            IYC PLRLLAME+FDKVN+LG+YCSL TGQEKK VPF+NH +CTVEMVSTD++Y+VA++D
Sbjct: 362  IYCSPLRLLAMEVFDKVNALGIYCSLHTGQEKKNVPFSNHTSCTVEMVSTDDIYDVAVID 421

Query: 319  EIQMMADPCRGYAWTRALLGLKADEVHLCGDPSVLEIVRKICAETGDELVENHYQRFKPL 140
            EIQMM+DPCRGYAWTRALLGLKADE+HLCGDPSVL +VRKIC+ETGDEL E HY+RFKPL
Sbjct: 422  EIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELFEQHYERFKPL 481

Query: 139  VVEAKTLLGDLRNVRPGDCVVAFSRREIFEVKLAIEKYTKHRCCVI 2
            VVEAKTLLG+L+NVR GDCVVAFSRREIFEVKLAIEK+T HRCCVI
Sbjct: 482  VVEAKTLLGELQNVRSGDCVVAFSRREIFEVKLAIEKHTNHRCCVI 527


>ref|XP_004138587.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Cucumis sativus]
          Length = 777

 Score =  537 bits (1384), Expect = e-150
 Identities = 255/354 (72%), Positives = 301/354 (85%), Gaps = 10/354 (2%)
 Frame = -1

Query: 1033 GSDGDSSKNVDS---------FDHVASRDPVEFYGELKSIETGVKRTQ-KDWDTLVEIFQ 884
            GS  D SKN DS         ++ + S DPVE Y EL+S+E G  + +  +W  L EIF 
Sbjct: 119  GSIVDDSKNGDSDLRSSKLRNYETIKSCDPVELYSELRSVEMGGSKVELSNWLILQEIFH 178

Query: 883  SFARSGWASDRSLAIYIGALFFPTAVQKFRSFFIKRCPNDVAKYLVSVGPSEESEQFLFP 704
             F  SGWAS+++L IYIG  FFPTAV KFR+FF+K+C  DV KYLV +GPS+++ +FLFP
Sbjct: 179  YFLHSGWASNQALGIYIGMSFFPTAVSKFRNFFLKKCSTDVVKYLVFLGPSDDAVKFLFP 238

Query: 703  IFAEFCLEKFPNEIKLFRDIVHSADLTKPHTWFPFARAMKRKIVYHCGPTNSGKTHNALQ 524
            IF E+CL +FP+EIK F+ +V SADLTKPHTWFPFARAMKRKI+YHCGPTNSGKT+NALQ
Sbjct: 239  IFVEYCLVEFPDEIKRFQSMVKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQ 298

Query: 523  RFMEAKKGIYCGPLRLLAMEIFDKVNSLGVYCSLLTGQEKKRVPFANHVACTVEMVSTDE 344
            RFMEAKKGIYC PLRLLAME+FDKVN+ GVYCSLLTGQEKK +PF++H+ACTVEMVST++
Sbjct: 299  RFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLLPFSSHIACTVEMVSTED 358

Query: 343  VYEVAILDEIQMMADPCRGYAWTRALLGLKADEVHLCGDPSVLEIVRKICAETGDELVEN 164
            +YE+A++DEIQMM+DPCRGYAWTRALLGLKADE+HLCGDPSVL +VRKIC+ETGDEL E 
Sbjct: 359  LYEIAVIDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQ 418

Query: 163  HYQRFKPLVVEAKTLLGDLRNVRPGDCVVAFSRREIFEVKLAIEKYTKHRCCVI 2
            HY+RFKPLVVEAKTLLGD +NVR GDC+VAFSRREIFEVKLAIEK+TKHRCCVI
Sbjct: 419  HYERFKPLVVEAKTLLGDFKNVRSGDCIVAFSRREIFEVKLAIEKFTKHRCCVI 472


>ref|XP_002524370.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
            gi|223536331|gb|EEF37981.1| ATP-dependent RNA and DNA
            helicase, putative [Ricinus communis]
          Length = 820

 Score =  533 bits (1372), Expect = e-149
 Identities = 280/501 (55%), Positives = 352/501 (70%), Gaps = 8/501 (1%)
 Frame = -1

Query: 1480 MVKGTATSLFRNNSSKENMSRIRMLLKNQSLHILEQRGCLNVPKRSNISHFSTQTSPVSI 1301
            M +G   SLFR  +SK  +SR R+ L NQ+ H   Q     V +  ++S F       S 
Sbjct: 1    MARGPVASLFRAYASKSKISRCRVFLYNQNFHSFRQFNNW-VLQSYHLSPFDVTCHHFST 59

Query: 1300 NGICRDRGRLLSSSF--YALGQKGYSNSSKCLDFGH-VSTQLCRVSTK--LVNLDGVRFR 1136
            + +     +L SS++  + +  + +S+  +  D  +  +++L    T   L N+D     
Sbjct: 60   SFVDLINSQLPSSNYPKFTINWRTFSSFDQDGDNKNSANSELEENDTVDILENVDENTME 119

Query: 1135 KGFNLVQLNWFXXXXXXXXXXXXXXXXXXXXXXEGSDGDSSKNVDSF---DHVASRDPVE 965
             G + V  + F                         D + +++ +     ++VA RD +E
Sbjct: 120  DGADGVNESTFSDPLVVDNENRCVNESTFSDPLVVDDENGNQDSNDLVRKENVAFRDAIE 179

Query: 964  FYGELKSIETGVKRTQKDWDTLVEIFQSFARSGWASDRSLAIYIGALFFPTAVQKFRSFF 785
             Y EL++ E      + DWDTL EIF  FA SGWA++++LAIYIG  FFPTA + FR+FF
Sbjct: 180  LYRELRNAEKNDTLKRSDWDTLQEIFYYFANSGWAANQALAIYIGRSFFPTAARNFRNFF 239

Query: 784  IKRCPNDVAKYLVSVGPSEESEQFLFPIFAEFCLEKFPNEIKLFRDIVHSADLTKPHTWF 605
             K+   ++A YLVS+GPS+ + +FLFPIF E+C+E+FP+EIK F+ ++ SADL KPHTWF
Sbjct: 240  CKKSSAELALYLVSIGPSDAAVRFLFPIFVEYCIEEFPDEIKRFQGMLQSADLRKPHTWF 299

Query: 604  PFARAMKRKIVYHCGPTNSGKTHNALQRFMEAKKGIYCGPLRLLAMEIFDKVNSLGVYCS 425
            PFAR MKRKI+YHCGPTNSGKT+NALQRFMEAKKG+YC PLRLLAME+FDKVN+ GVYCS
Sbjct: 300  PFARVMKRKIIYHCGPTNSGKTYNALQRFMEAKKGVYCSPLRLLAMEVFDKVNAHGVYCS 359

Query: 424  LLTGQEKKRVPFANHVACTVEMVSTDEVYEVAILDEIQMMADPCRGYAWTRALLGLKADE 245
            L TGQEKK VPFANHVACTVEMVS+DE+Y+VA++DEIQMM D  RGYAWTRALLGLKADE
Sbjct: 360  LYTGQEKKTVPFANHVACTVEMVSSDELYDVAVIDEIQMMGDAFRGYAWTRALLGLKADE 419

Query: 244  VHLCGDPSVLEIVRKICAETGDELVENHYQRFKPLVVEAKTLLGDLRNVRPGDCVVAFSR 65
            +HLCGDPSVL IVRKIC+ETGDEL+ENHY RFKPLVVEAKTLLGDL+NVR GDCVVAFSR
Sbjct: 420  IHLCGDPSVLNIVRKICSETGDELIENHYGRFKPLVVEAKTLLGDLKNVRSGDCVVAFSR 479

Query: 64   REIFEVKLAIEKYTKHRCCVI 2
            REIFEVKL IEK+TKHRCCVI
Sbjct: 480  REIFEVKLTIEKHTKHRCCVI 500