BLASTX nr result
ID: Coptis21_contig00016573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016573
(1398 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635533.1| PREDICTED: LOB domain-containing protein 36-... 269 1e-69
ref|XP_002263109.2| PREDICTED: LOB domain-containing protein 36-... 265 3e-68
emb|CBI23279.3| unnamed protein product [Vitis vinifera] 265 3e-68
ref|XP_004148465.1| PREDICTED: LOB domain-containing protein 36-... 254 5e-65
ref|XP_002263136.2| PREDICTED: LOW QUALITY PROTEIN: LOB domain-c... 253 6e-65
>ref|XP_003635533.1| PREDICTED: LOB domain-containing protein 36-like, partial [Vitis
vinifera]
Length = 252
Score = 269 bits (688), Expect = 1e-69
Identities = 145/207 (70%), Positives = 163/207 (78%), Gaps = 10/207 (4%)
Frame = -2
Query: 1346 MASSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPAQR 1167
M+SSNSPCAACK LRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNV+KLLNELN A R
Sbjct: 1 MSSSNSPCAACKLLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVSKLLNELNAAHR 60
Query: 1166 EDAVNSLAYEAETRLRDPVYGCVGIISILQSKLKQVQNDLYNAKKELSTYIGPSAMQPLI 987
EDAVNSLAYEAE RLRDPVYGCVG+ISILQ +LKQVQNDL+ AKKELS YIGPSAM P+
Sbjct: 61 EDAVNSLAYEAEARLRDPVYGCVGLISILQQRLKQVQNDLFTAKKELSAYIGPSAMLPIP 120
Query: 986 LHQAHHPQMIQHHGGNIGAFGM---SSMGLCLPSGPTVQSQLMLRDP------QH-QQLL 837
PQ QH + + + L LP+GPT QL++R+P QH QQ+L
Sbjct: 121 QPAGCLPQ--QHMSNPCSSSQIPYNTPPMLGLPTGPTHGRQLVIREPHQTQQYQHRQQIL 178
Query: 836 EAQQFAVAVAAREQQELMRSYEQQQQE 756
EAQQ A AVAAREQQE++R+YEQQQQ+
Sbjct: 179 EAQQIAEAVAAREQQEMLRTYEQQQQQ 205
>ref|XP_002263109.2| PREDICTED: LOB domain-containing protein 36-like [Vitis vinifera]
Length = 292
Score = 265 bits (676), Expect = 3e-68
Identities = 143/207 (69%), Positives = 162/207 (78%), Gaps = 10/207 (4%)
Frame = -2
Query: 1346 MASSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPAQR 1167
M+SSNSPCAACK LRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNV+KLLNELN A R
Sbjct: 1 MSSSNSPCAACKLLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVSKLLNELNAAHR 60
Query: 1166 EDAVNSLAYEAETRLRDPVYGCVGIISILQSKLKQVQNDLYNAKKELSTYIGPSAMQPLI 987
EDAVNSLAYEAE RLRDPVYGCVG+ISILQ +LKQVQNDL+ AKKELS YIGPSAM P+
Sbjct: 61 EDAVNSLAYEAEARLRDPVYGCVGLISILQQRLKQVQNDLFTAKKELSAYIGPSAMLPIP 120
Query: 986 LHQAHHPQMIQHHGGNIGAFGM---SSMGLCLPSGPTVQSQLMLRDP------QH-QQLL 837
PQ QH + + + L L +GPT QL++R+P QH QQ+L
Sbjct: 121 QPAGCLPQ--QHMSNPCSSSQIPYNTPPMLGLATGPTHGRQLVIREPHQTQQYQHQQQIL 178
Query: 836 EAQQFAVAVAAREQQELMRSYEQQQQE 756
EAQQ A AVAAREQQE++R+YEQQ+Q+
Sbjct: 179 EAQQIAEAVAAREQQEMLRTYEQQRQQ 205
>emb|CBI23279.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 265 bits (676), Expect = 3e-68
Identities = 143/207 (69%), Positives = 162/207 (78%), Gaps = 10/207 (4%)
Frame = -2
Query: 1346 MASSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPAQR 1167
M+SSNSPCAACK LRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNV+KLLNELN A R
Sbjct: 1 MSSSNSPCAACKLLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVSKLLNELNAAHR 60
Query: 1166 EDAVNSLAYEAETRLRDPVYGCVGIISILQSKLKQVQNDLYNAKKELSTYIGPSAMQPLI 987
EDAVNSLAYEAE RLRDPVYGCVG+ISILQ +LKQVQNDL+ AKKELS YIGPSAM P+
Sbjct: 61 EDAVNSLAYEAEARLRDPVYGCVGLISILQQRLKQVQNDLFTAKKELSAYIGPSAMLPIP 120
Query: 986 LHQAHHPQMIQHHGGNIGAFGM---SSMGLCLPSGPTVQSQLMLRDP------QH-QQLL 837
PQ QH + + + L L +GPT QL++R+P QH QQ+L
Sbjct: 121 QPAGCLPQ--QHMSNPCSSSQIPYNTPPMLGLATGPTHGRQLVIREPHQTQQYQHQQQIL 178
Query: 836 EAQQFAVAVAAREQQELMRSYEQQQQE 756
EAQQ A AVAAREQQE++R+YEQQ+Q+
Sbjct: 179 EAQQIAEAVAAREQQEMLRTYEQQRQQ 205
>ref|XP_004148465.1| PREDICTED: LOB domain-containing protein 36-like [Cucumis sativus]
gi|449529672|ref|XP_004171822.1| PREDICTED: LOB
domain-containing protein 36-like [Cucumis sativus]
Length = 309
Score = 254 bits (648), Expect = 5e-65
Identities = 140/224 (62%), Positives = 160/224 (71%), Gaps = 22/224 (9%)
Frame = -2
Query: 1346 MASSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPAQR 1167
M+SSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELN QR
Sbjct: 1 MSSSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNATQR 60
Query: 1166 EDAVNSLAYEAETRLRDPVYGCVGIISILQSKLKQVQNDLYNAKKELSTYIGPSAMQPLI 987
EDAVNSLAYEAE RLRDPVYGCVG+IS+LQ KLKQ+Q DLYNAKKEL++YIGP AM P++
Sbjct: 61 EDAVNSLAYEAEFRLRDPVYGCVGLISVLQHKLKQMQTDLYNAKKELASYIGPQAMLPIL 120
Query: 986 LHQAHHPQMIQHHGGNIGAFGMSSMGLCLPSGPTVQSQLMLRD---------------PQ 852
Q P HH + G++ PS P Q+++RD Q
Sbjct: 121 QPQT-TPSPYNHHLSPM--MGIAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHLQQQ 177
Query: 851 HQQLLEAQQFAVAVAAREQQELMRSYE-------QQQQELARYS 741
QQL EAQQ A AVAARE QE+ ++YE Q+QQEL ++
Sbjct: 178 QQQLFEAQQLAAAVAARE-QEMFKAYEHKQSQQQQRQQELLSFN 220
>ref|XP_002263136.2| PREDICTED: LOW QUALITY PROTEIN: LOB domain-containing protein 36
[Vitis vinifera]
Length = 283
Score = 253 bits (647), Expect = 6e-65
Identities = 137/216 (63%), Positives = 161/216 (74%), Gaps = 14/216 (6%)
Frame = -2
Query: 1346 MASSNSPCAACKFLRRKCTQECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELNPAQR 1167
M+SSNSPCAACK RRKCTQEC++APYFPPDQP KFANVHKVFGASNVAKLLNE+N A R
Sbjct: 1 MSSSNSPCAACKLQRRKCTQECIYAPYFPPDQPHKFANVHKVFGASNVAKLLNEINVAHR 60
Query: 1166 EDAVNSLAYEAETRLRDPVYGCVGIISILQSKLKQVQNDLYNAKKELSTYIGPSAMQPLI 987
EDAVNSLAYEAE RL DPVYGCVG+ISILQ LKQVQ+DL AKKELS YIGP AMQP
Sbjct: 61 EDAVNSLAYEAEARLHDPVYGCVGLISILQQTLKQVQSDLLAAKKELSAYIGPIAMQPNF 120
Query: 986 LHQAHHPQ--MIQHHGGNIGAFGMSSMGLCLPSGPTVQSQLMLRDPQHQQ---------- 843
H + PQ M ++ + MS +G LP+G + QL++R+PQ QQ
Sbjct: 121 QHPGYMPQQHMTSPSSSSLIPYNMSPLG--LPTGASHGGQLVIREPQPQQSQQYQHQRQN 178
Query: 842 LLEAQQFAVAVAAREQQELMRSYEQQ--QQELARYS 741
+LEAQQ +AAREQQE++R++EQQ QQEL R++
Sbjct: 179 ILEAQQ----MAAREQQEMLRTFEQQQRQQELMRFN 210