BLASTX nr result

ID: Coptis21_contig00016558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016558
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28245.3| unnamed protein product [Vitis vinifera]              119   3e-25
emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]   119   3e-25
ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   107   8e-22

>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  119 bits (298), Expect = 3e-25
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
 Frame = -3

Query: 469 LACDGALRAFRSVLKGIQMELKKSSISYSEIMLCLNAILSLTKMVCDDATLREFN--ELI 296
           LAC+ A+R FRSVLKG+Q+E+K  S+ Y++I+LCLN IL  TK + +D  L +    EL 
Sbjct: 498 LACEAAIRIFRSVLKGVQIEMKNPSVDYNQILLCLNTILRFTKKISEDVGLADTGIVELH 557

Query: 295 HTSFQFIEAIRXXXXXXXXXXXLYKVPLDIKYINDMESVIGTEDPEVPEISCIKYMDMVS 116
           +T  QF+EA+            LYKV  DIKYI+   SV      EV  I  I YMDM S
Sbjct: 558 YTFLQFVEAVTTELEPSILGSPLYKVAFDIKYIDRPLSVYDINHAEVLGIRSIAYMDMAS 617

Query: 115 PTVCLTILQFSMVAQSIQNASRMDIILQVMKKHLKLIL 2
           P V LT+L   +   +  +A +M+ IL  ++KH K ++
Sbjct: 618 PVVYLTMLYVYIAVHATFDAPKMEFILLGVQKHFKFLM 655


>emb|CAN64432.1| hypothetical protein VITISV_026342 [Vitis vinifera]
          Length = 1138

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 2/158 (1%)
 Frame = -3

Query: 469 LACDGALRAFRSVLKGIQMELKKSSISYSEIMLCLNAILSLTKMVCDDATLREFN--ELI 296
           LAC+ A+R FRSVLKG+Q+E+K  S+ Y++I+LCLN IL  TK + +D  L +    EL 
Sbjct: 521 LACEAAIRIFRSVLKGVQIEMKNPSVDYNQILLCLNTILRFTKKISEDVGLADTGIVELH 580

Query: 295 HTSFQFIEAIRXXXXXXXXXXXLYKVPLDIKYINDMESVIGTEDPEVPEISCIKYMDMVS 116
           +T  QF+EA+            LYKV  DIKYI+   SV      EV  I  I YMDM S
Sbjct: 581 YTFLQFVEAVTTELEPSILGSPLYKVAFDIKYIDRPLSVYDINHAEVLGIRSIAYMDMXS 640

Query: 115 PTVCLTILQFSMVAQSIQNASRMDIILQVMKKHLKLIL 2
           P V LT+L   +   +  +A +M+ IL  ++KH K ++
Sbjct: 641 PVVYLTMLYVYIAVHATFDAPKMEFILLGVQKHFKFLM 678


>ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis]
           gi|223528402|gb|EEF30438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1038

 Score =  117 bits (294), Expect = 7e-25
 Identities = 68/157 (43%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
 Frame = -3

Query: 466 ACDGALRAFRSVLKGIQMELKKSSISYSEIMLCLNAILSLTKMVCDDATLREF--NELIH 293
           ACD ALR FRS+LKG+Q+EL  SSI+Y++IMLCLN +L   K VC +     +  N+  H
Sbjct: 403 ACDAALRIFRSLLKGVQVELTSSSITYADIMLCLNTVLRFIKEVCQNINSGGYGDNKFQH 462

Query: 292 TSFQFIEAIRXXXXXXXXXXXLYKVPLDIKYINDMESVIGTEDPEVPEISCIKYMDMVSP 113
           TS QF++A+            LYKV LD+  I +++SV    + +   IS + YMDMVSP
Sbjct: 463 TSIQFLQAVIDEIEPAILGSPLYKVSLDLVCIKNLQSVNDVRNKDFLGISSVAYMDMVSP 522

Query: 112 TVCLTILQFSMVAQSIQNASRMDIILQVMKKHLKLIL 2
            V L IL   M  QS  +  R ++I   + K  KLIL
Sbjct: 523 LVYLIILSICMGTQSTSHRPRAELISTTLYKIFKLIL 559


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 2/157 (1%)
 Frame = -3

Query: 466 ACDGALRAFRSVLKGIQMELKKSSISYSEIMLCLNAILSLTKMVCDDATLR--EFNELIH 293
           ACD AL+ FRS LKG+QM+ + SS  Y++IMLCLN +L   K +C+D T      +EL H
Sbjct: 476 ACDAALKIFRSFLKGVQMDFRSSSTKYNDIMLCLNTLLRFIKKICEDVTSEGGRSSELHH 535

Query: 292 TSFQFIEAIRXXXXXXXXXXXLYKVPLDIKYINDMESVIGTEDPEVPEISCIKYMDMVSP 113
           TS QF+EA+            LYKV L+   I +++ V    + +   IS + YMDMVSP
Sbjct: 536 TSLQFLEAVVQDLEPSILGSPLYKVSLNFTCIENLQMVDNIRNVKYLGISSVAYMDMVSP 595

Query: 112 TVCLTILQFSMVAQSIQNASRMDIILQVMKKHLKLIL 2
            V L++L   +V  S      M+++LQ +++  K IL
Sbjct: 596 LVYLSVLYICVVIPSTPATRGMELLLQGLRRFFKTIL 632


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
           gi|355510459|gb|AES91601.1| Telomere-associated protein
           RIF1 [Medicago truncatula]
          Length = 1121

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/154 (37%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
 Frame = -3

Query: 460 DGALRAFRSVLKGIQMELKKSSISYSEIMLCLNAILSLTKMVCDD--ATLREFNELIHTS 287
           D AL+ F+ VLKG++++++  S +Y  ++ CLN +L+  K+VC+D  +   E  ++ +TS
Sbjct: 486 DAALKIFKYVLKGVKLDMESPSTNYDAVICCLNTLLTFVKIVCEDLYSDGSENYDVYYTS 545

Query: 286 FQFIEAIRXXXXXXXXXXXLYKVPLDIKYINDMESVIGTEDPEVPEISCIKYMDMVSPTV 107
            +FI+A+            LYK PLD+KYINDM+SV   +  +   ++CI YMD VSP V
Sbjct: 546 LRFIDAVTKELGSSILGSPLYKFPLDLKYINDMQSVDHNKHLKFLTVNCICYMDKVSPLV 605

Query: 106 CLTILQFSMVAQSIQNASRMDIILQVMKKHLKLI 5
            L +L F M+ Q      + D I Q M ++ K I
Sbjct: 606 YLIVLYFHMMVQLTLKFQQSDHISQGMSEYFKFI 639


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