BLASTX nr result

ID: Coptis21_contig00016548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016548
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
emb|CBI36056.3| unnamed protein product [Vitis vinifera]               58   2e-06
ref|XP_002515962.1| conserved hypothetical protein [Ricinus comm...    56   9e-06

>ref|XP_002319640.1| predicted protein [Populus trichocarpa] gi|222858016|gb|EEE95563.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -1

Query: 454 GNQPGENTLKKELWREFEAASLSSNVLRLDASVFRDTSRKGFLD 323
           G +PGENTLKKELW +FEAAS      RLDAS F+ T++KGFLD
Sbjct: 408 GKRPGENTLKKELWTKFEAASTYG--FRLDASAFQGTAQKGFLD 449


>emb|CBI36056.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = -1

Query: 457 IGNQPGENTLKKELWREFEAASLSSNVLRLDASVFRDTSRKGFLD 323
           +G +PGENTLKKELW +FEAA  S+N L L+ SVF +T+ KGFL+
Sbjct: 338 MGKRPGENTLKKELWTKFEAA--STNGLHLNVSVFEETTEKGFLE 380


>ref|XP_002515962.1| conserved hypothetical protein [Ricinus communis]
           gi|223544867|gb|EEF46382.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 523

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -1

Query: 454 GNQPGENTLKKELWREFEAASLSSNVLRLDASVFRDTSRKGFLD 323
           G +PGENTLKKELW +FEAA  SS  LRLD S  + T++KGFLD
Sbjct: 467 GKRPGENTLKKELWTKFEAA--SSYGLRLDVSSLQRTAQKGFLD 508