BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016540
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ...   192   2e-47
ref|XP_004135423.1| PREDICTED: putative U-box domain-containing ...   164   9e-39
ref|NP_177060.3| putative U-box domain-containing protein 42 [Ar...   160   1e-37

>ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|222865035|gb|EEF02166.1|
            predicted protein [Populus trichocarpa]
          Length = 935

 Score =  202 bits (514), Expect = 2e-50
 Identities = 98/142 (69%), Positives = 114/142 (80%)
 Frame = +3

Query: 3    PIHRGVCSSQSTFCLLDAKAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXX 182
            P+HRG CSSQ+TFCL+DAKAVERLLACLDHENV+VVEAALSAICTL              
Sbjct: 787  PVHRGACSSQNTFCLVDAKAVERLLACLDHENVEVVEAALSAICTLLDDKVDVDKSVGML 846

Query: 183  XXXXAIQHVLNVLREHREESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHH 362
                A QHVLNV++EH+ E L +KSFW+I++FLLKGG   ASDISQDR LPATL++AFHH
Sbjct: 847  CEVNATQHVLNVVKEHKGEGLRKKSFWLIDRFLLKGGKRPASDISQDRLLPATLVSAFHH 906

Query: 363  GDVNTRQNAEKILRHLNKIPDF 428
            GD++TRQ AEKILRHLNK+PDF
Sbjct: 907  GDIDTRQMAEKILRHLNKMPDF 928


>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/142 (66%), Positives = 113/142 (79%)
 Frame = +3

Query: 3    PIHRGVCSSQSTFCLLDAKAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXX 182
            P+HRG CSSQ+TFCL+DAKAVERLLACLDHENV+VVEAALSA+CTL              
Sbjct: 801  PVHRGACSSQNTFCLVDAKAVERLLACLDHENVEVVEAALSAVCTLLDDEVDVEMSVGML 860

Query: 183  XXXXAIQHVLNVLREHREESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHH 362
                AIQ VLN ++EH+ E LW+KSFW+I++FL+KGG   ASDISQDR LPATL+ AFHH
Sbjct: 861  CEVNAIQLVLNAVKEHKGEGLWKKSFWLIDRFLVKGGSRCASDISQDRLLPATLVNAFHH 920

Query: 363  GDVNTRQNAEKILRHLNKIPDF 428
            GD++TRQ AE+ILRHLNK+P+F
Sbjct: 921  GDIDTRQMAERILRHLNKMPNF 942


>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
            vinifera]
          Length = 1055

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/146 (63%), Positives = 112/146 (76%)
 Frame = +3

Query: 3    PIHRGVCSSQSTFCLLDAKAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXX 182
            P+HRG CSSQ+TFCL+DAKAVERLLACL+HEN +V+EAALSA+CTL              
Sbjct: 908  PVHRGACSSQNTFCLVDAKAVERLLACLEHENAEVIEAALSALCTLLDDKVDVDKSVSLL 967

Query: 183  XXXXAIQHVLNVLREHREESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHH 362
                 IQHVLNV++EHREE L +KS WVIE+FL+KGGD SAS ISQDR LPATL++AFHH
Sbjct: 968  SGVDCIQHVLNVVKEHREEGLREKSLWVIERFLMKGGDRSASYISQDRSLPATLVSAFHH 1027

Query: 363  GDVNTRQNAEKILRHLNKIPDFSAKF 440
            GD +T+Q A KILRHLN++P  +  F
Sbjct: 1028 GDGSTKQMAAKILRHLNQMPKVTTNF 1053


>ref|XP_004135423.1| PREDICTED: putative U-box domain-containing protein 42-like [Cucumis
            sativus] gi|449493524|ref|XP_004159331.1| PREDICTED:
            putative U-box domain-containing protein 42-like [Cucumis
            sativus]
          Length = 1015

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/144 (56%), Positives = 103/144 (71%)
 Frame = +3

Query: 3    PIHRGVCSSQSTFCLLDAKAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXX 182
            P+H+G CSSQ+TFCL+ AKA+E+LL CLD+EN +VVEAALSAICTL              
Sbjct: 867  PVHKGACSSQNTFCLVHAKAIEKLLTCLDNENEEVVEAALSAICTLVDDKVDMDRSVRLL 926

Query: 183  XXXXAIQHVLNVLREHREESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHH 362
                 I+HVLNV+  H++ES+  KSFW++EK LLKGG+ S S+ISQDR LPA L TA H 
Sbjct: 927  IEFNTIRHVLNVVGIHKQESVLHKSFWLMEKLLLKGGEESLSNISQDRSLPAILATASHQ 986

Query: 363  GDVNTRQNAEKILRHLNKIPDFSA 434
             +  TR+ AEKIL HL K+P+FSA
Sbjct: 987  WNSETRRIAEKILTHLKKVPNFSA 1010


>ref|NP_177060.3| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
            gi|75333632|sp|Q9CAA7.1|PUB42_ARATH RecName:
            Full=Putative U-box domain-containing protein 42;
            AltName: Full=Plant U-box protein 42
            gi|12323215|gb|AAG51587.1|AC011665_8 hypothetical protein
            [Arabidopsis thaliana] gi|332196744|gb|AEE34865.1|
            putative U-box domain-containing protein 42 [Arabidopsis
            thaliana]
          Length = 1033

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/142 (53%), Positives = 104/142 (73%)
 Frame = +3

Query: 6    IHRGVCSSQSTFCLLDAKAVERLLACLDHENVQVVEAALSAICTLXXXXXXXXXXXXXXX 185
            IHRGVCS+++TFCL++A A+ +LLACL  + V+VVE+AL+AICTL               
Sbjct: 888  IHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLS 947

Query: 186  XXXAIQHVLNVLREHREESLWQKSFWVIEKFLLKGGDSSASDISQDRFLPATLITAFHHG 365
               A+Q +LN ++EH++ESL QK+FW+I+KF+++GGD  AS+ISQDR L   L++AFH G
Sbjct: 948  EMNAVQLILNAVKEHKKESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRG 1007

Query: 366  DVNTRQNAEKILRHLNKIPDFS 431
            D NTRQ AE ILR L+K+P FS
Sbjct: 1008 DGNTRQMAENILRRLDKMPSFS 1029