BLASTX nr result

ID: Coptis21_contig00016527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016527
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38126.3| unnamed protein product [Vitis vinifera]              112   8e-23
ref|XP_002273027.1| PREDICTED: uncharacterized protein LOC100244...   111   2e-22
ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|2...   106   4e-21
ref|XP_002533796.1| conserved hypothetical protein [Ricinus comm...   105   9e-21
ref|XP_002325566.1| predicted protein [Populus trichocarpa] gi|1...   101   1e-19

>emb|CBI38126.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  112 bits (280), Expect = 8e-23
 Identities = 60/104 (57%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
 Frame = -3

Query: 627 PRSRMSLACLVCHS-DSPTQXXXXXXXXXXXSEGRCSTIITCLTRKVSLAHDTTNT-MIT 454
           P   MSLACLVCHS +SP+            +EGRCS I  CL R+ SL   T N+ +I 
Sbjct: 116 PSPDMSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCLARRASLPAPTANSSIIR 175

Query: 453 SSKVTPQPFMANGQGLMGTPRLVRSRAVRRDLVRDWNFDETVME 322
           SSKVTP P + N  G+ GTPRLVRS AVRRD+VRDWNFDE VME
Sbjct: 176 SSKVTPHPSIPNSSGIPGTPRLVRSCAVRRDIVRDWNFDEVVME 219


>ref|XP_002273027.1| PREDICTED: uncharacterized protein LOC100244175 [Vitis vinifera]
          Length = 101

 Score =  111 bits (277), Expect = 2e-22
 Identities = 59/100 (59%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
 Frame = -3

Query: 615 MSLACLVCHS-DSPTQXXXXXXXXXXXSEGRCSTIITCLTRKVSLAHDTTNT-MITSSKV 442
           MSLACLVCHS +SP+            +EGRCS I  CL R+ SL   T N+ +I SSKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCLARRASLPAPTANSSIIRSSKV 60

Query: 441 TPQPFMANGQGLMGTPRLVRSRAVRRDLVRDWNFDETVME 322
           TP P + N  G+ GTPRLVRS AVRRD+VRDWNFDE VME
Sbjct: 61  TPHPSIPNSSGIPGTPRLVRSCAVRRDIVRDWNFDEVVME 100


>ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|222835697|gb|EEE74132.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  106 bits (265), Expect = 4e-21
 Identities = 58/101 (57%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = -3

Query: 615 MSLACLVCHS-DSPTQXXXXXXXXXXXSEGRCSTIITCLTRKVSLAHDTTNTMI-TSSKV 442
           MSLACLVCHS +SP+            +EGRCS I  C+TRK+SL     N+   +SSKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIANCITRKLSLPPPRANSSFASSSKV 60

Query: 441 TPQPFMANGQGLMGTPRLVRSRAVRRDLVRDWNFDETVMER 319
           TPQP       + G PRLVRSRAVRRDLVRDWNFD  VMER
Sbjct: 61  TPQPSSPGNDDMTGPPRLVRSRAVRRDLVRDWNFDGFVMER 101


>ref|XP_002533796.1| conserved hypothetical protein [Ricinus communis]
           gi|223526269|gb|EEF28583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score =  105 bits (262), Expect = 9e-21
 Identities = 59/101 (58%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = -3

Query: 615 MSLACLVCHS-DSPTQXXXXXXXXXXXSEGRCSTIITCLTRKVSLAHDTTNTMITS-SKV 442
           MSLACLVCHS +SP+            +EGRCS I  CLTRK+SL     N+ I S SKV
Sbjct: 1   MSLACLVCHSVESPSHSFRSYSVSSSDNEGRCSAIGKCLTRKLSLPPPRGNSSIASTSKV 60

Query: 441 TPQPFMANGQGLMGTPRLVRSRAVRRDLVRDWNFDETVMER 319
           TPQP       + G PRLVRSRAVRRDLVRDWNF+  VMER
Sbjct: 61  TPQPSNPGNDEITGPPRLVRSRAVRRDLVRDWNFERVVMER 101


>ref|XP_002325566.1| predicted protein [Populus trichocarpa] gi|118482956|gb|ABK93390.1|
           unknown [Populus trichocarpa]
           gi|222862441|gb|EEE99947.1| predicted protein [Populus
           trichocarpa]
          Length = 102

 Score =  101 bits (252), Expect = 1e-19
 Identities = 54/102 (52%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
 Frame = -3

Query: 615 MSLACLVCHS-DSPTQXXXXXXXXXXXSEGRCSTIITCLTRKVSLAHDTTNTMI--TSSK 445
           MSLACL CHS +SP++           +EGRC+ I  C+TRK+S      N+    +SSK
Sbjct: 1   MSLACLACHSVESPSRSFRSYSVSSSDNEGRCTAIANCITRKLSHPPPRANSSFASSSSK 60

Query: 444 VTPQPFMANGQGLMGTPRLVRSRAVRRDLVRDWNFDETVMER 319
           V+PQP   +   + G PRLVRSRAVRRDLVRDWNFD  VMER
Sbjct: 61  VSPQPLNPSNDSMTGPPRLVRSRAVRRDLVRDWNFDGVVMER 102


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