BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016526
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
ref|XP_002528578.1| pentatricopeptide repeat-containing protein,...    73   1e-10
ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containi...    67   8e-09
ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08

>ref|XP_002316451.1| predicted protein [Populus trichocarpa] gi|222865491|gb|EEF02622.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = +1

Query: 487 QEGNAQEAV-LLKDMEAKGVLHFSLVLTYSTLVEGPLKSKDFSGTSVWCREMVEKGFIPR 663
           +EG   E   L+ DM+AKG++  +   TYS L++G    KDF+G  VW REM+E GF+P 
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEAD--TYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660

Query: 664 FYICNELITGLRDEGKLQQVELLRNDL**KGVAEHTVND 780
             ICNEL TGLR +G+LQ+ + + +++   G+     N+
Sbjct: 661 VCICNELSTGLRKDGRLQEAQSICSEMIANGMDNLDTNE 699


>ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531974|gb|EEF33786.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 817

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 34/68 (50%), Positives = 45/68 (66%)
 Frame = +1

Query: 565 TYSTLVEGPLKSKDFSGTSVWCREMVEKGFIPRFYICNELITGLRDEGKLQQVELLRNDL 744
           TY  LV+G    KDFSG  VW REMVE  F+P   ICNEL  GL  EG+LQ+V+++ +++
Sbjct: 737 TYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796

Query: 745 **KGVAEH 768
             KG+  H
Sbjct: 797 NVKGIINH 804


>ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 34/81 (41%), Positives = 49/81 (60%)
 Frame = +1

Query: 514 LLKDMEAKGVLHFSLVLTYSTLVEGPLKSKDFSGTSVWCREMVEKGFIPRFYICNELITG 693
           L+ DM+ +G++      TY  L+ G  K KDF G  VW REM E GF P   IC+ LITG
Sbjct: 728 LVNDMKIRGLI--PKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITG 785

Query: 694 LRDEGKLQQVELLRNDL**KG 756
           LR+EG+    +++ +++  KG
Sbjct: 786 LREEGRSHDADVICSEMNMKG 806


>ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/77 (41%), Positives = 53/77 (68%)
 Frame = +1

Query: 514 LLKDMEAKGVLHFSLVLTYSTLVEGPLKSKDFSGTSVWCREMVEKGFIPRFYICNELITG 693
           L+ DM+AKG++    V TY+ L++G    KDF+G   W REMVE+G +    +C +LI+G
Sbjct: 696 LVDDMKAKGLV--PKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISG 753

Query: 694 LRDEGKLQQVELLRNDL 744
           LR+EG L++ +++ ++L
Sbjct: 754 LREEGMLREAQIVSSEL 770