BLASTX nr result

ID: Coptis21_contig00016510 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016510
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [...    65   6e-09
ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis...    64   1e-08
ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus ...    63   3e-08
ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002870270.1| predicted protein [Arabidopsis lyrata subsp....    61   1e-07

>ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [Glycine max]
          Length = 415

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = -3

Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTDISYQRHND 123
           FAS+WNT VW+ML+N F++IV ATSQRYLK Q+  +L ALT+ S    +D
Sbjct: 364 FASVWNTVVWLMLMNFFVKIVNATSQRYLKKQQETQLAALTEKSTPTDSD 413


>ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera]
           gi|297737027|emb|CBI26228.3| unnamed protein product
           [Vitis vinifera]
          Length = 439

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -3

Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTD 147
           FASIWNT VW+MLIN F +IVTAT+Q +LK Q+ KEL AL D
Sbjct: 382 FASIWNTVVWLMLINFFFKIVTATAQNFLKKQQEKELLALKD 423


>ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus communis]
           gi|223543858|gb|EEF45384.1| vacuole membrane protein,
           putative [Ricinus communis]
          Length = 427

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -3

Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALT-DISYQRHND 123
           FA++WNT VW+ML+N F +IV AT+QRYLK Q+ K+L  LT ++S   H+D
Sbjct: 377 FAALWNTIVWLMLLNFFFKIVNATAQRYLKKQQEKQLAELTNNVSSSTHSD 427


>ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|222852344|gb|EEE89891.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = -3

Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTD-ISYQRHND 123
           F  IWNT VW+ML+N F +IV AT+Q YLK Q+ KEL ALT+  S   H+D
Sbjct: 363 FTGIWNTVVWLMLLNFFFKIVNATAQMYLKKQQEKELAALTNRASASTHSD 413


>ref|XP_002870270.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316106|gb|EFH46529.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 417

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = -3

Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALT 150
           FASIWN  VW+ML+N F++IVTAT+QR+LK ++ KE+ ALT
Sbjct: 374 FASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMAALT 414


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