BLASTX nr result
ID: Coptis21_contig00016510
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00016510 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [... 65 6e-09 ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis... 64 1e-08 ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus ... 63 3e-08 ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002870270.1| predicted protein [Arabidopsis lyrata subsp.... 61 1e-07 >ref|XP_003539287.1| PREDICTED: vacuole membrane protein 1-like [Glycine max] Length = 415 Score = 65.1 bits (157), Expect = 6e-09 Identities = 29/50 (58%), Positives = 38/50 (76%) Frame = -3 Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTDISYQRHND 123 FAS+WNT VW+ML+N F++IV ATSQRYLK Q+ +L ALT+ S +D Sbjct: 364 FASVWNTVVWLMLMNFFVKIVNATSQRYLKKQQETQLAALTEKSTPTDSD 413 >ref|XP_002281783.1| PREDICTED: vacuole membrane protein 1 [Vitis vinifera] gi|297737027|emb|CBI26228.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/42 (69%), Positives = 34/42 (80%) Frame = -3 Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTD 147 FASIWNT VW+MLIN F +IVTAT+Q +LK Q+ KEL AL D Sbjct: 382 FASIWNTVVWLMLINFFFKIVTATAQNFLKKQQEKELLALKD 423 >ref|XP_002516770.1| vacuole membrane protein, putative [Ricinus communis] gi|223543858|gb|EEF45384.1| vacuole membrane protein, putative [Ricinus communis] Length = 427 Score = 62.8 bits (151), Expect = 3e-08 Identities = 28/51 (54%), Positives = 39/51 (76%), Gaps = 1/51 (1%) Frame = -3 Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALT-DISYQRHND 123 FA++WNT VW+ML+N F +IV AT+QRYLK Q+ K+L LT ++S H+D Sbjct: 377 FAALWNTIVWLMLLNFFFKIVNATAQRYLKKQQEKQLAELTNNVSSSTHSD 427 >ref|XP_002312524.1| predicted protein [Populus trichocarpa] gi|222852344|gb|EEE89891.1| predicted protein [Populus trichocarpa] Length = 413 Score = 61.2 bits (147), Expect = 8e-08 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 1/51 (1%) Frame = -3 Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALTD-ISYQRHND 123 F IWNT VW+ML+N F +IV AT+Q YLK Q+ KEL ALT+ S H+D Sbjct: 363 FTGIWNTVVWLMLLNFFFKIVNATAQMYLKKQQEKELAALTNRASASTHSD 413 >ref|XP_002870270.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316106|gb|EFH46529.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 417 Score = 60.8 bits (146), Expect = 1e-07 Identities = 26/41 (63%), Positives = 35/41 (85%) Frame = -3 Query: 272 FASIWNTAVWVMLINLFIEIVTATSQRYLKNQRNKELCALT 150 FASIWN VW+ML+N F++IVTAT+QR+LK ++ KE+ ALT Sbjct: 374 FASIWNGIVWLMLLNFFVKIVTATAQRHLKKKQEKEMAALT 414