BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016507
         (2359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-117
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi...   429   e-117
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   428   e-117
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   428   e-117
ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|2...   414   e-113

>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Glycine max]
          Length = 629

 Score =  429 bits (1104), Expect = e-117
 Identities = 252/599 (42%), Positives = 358/599 (59%), Gaps = 2/599 (0%)
 Frame = -3

Query: 2267 SNKFILSPRRSCNYFSTESVLEQNKEDDHVLAVLTDILSKSTSNDEIKTAIKSNHVLVTP 2088
            ++ F L+P  S   FS+E VL Q  + DH+L  + DI SK   +++ KT + SN V +T 
Sbjct: 38   NSTFPLNP--SFRRFSSEPVLAQ-ADTDHLL--VADIFSKPVDSEDFKTLLGSNRVSITH 92

Query: 2087 KLVFSTLNSLQGDVETARKFFHFVDETGNERMLTFNCYYLMLGILGTSGKEYVHEFWRLL 1908
              V + L     +V+ AR+FF +V E   ER L+  CY  ML +LGT+G  +V EFW L+
Sbjct: 93   DAVLAVLGKFDSNVDAARRFFQWVSENHPER-LSSKCYNSMLCVLGTNG--FVDEFWDLV 149

Query: 1907 QVMXXXXXXXXXXXTYDKVADSFQXXXXXXXXXXXXGMYSNSQAENSMKQVASRISNVIN 1728
             VM             ++V +SF+            G++ NS+ +N      + +  ++ 
Sbjct: 150  NVMKKKGYGVSKGVK-ERVLESFEKGGMDGDVAKLKGLFDNSKEKN-----IAIVCRIVR 203

Query: 1727 EKYWFDFPSDVQQKILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDCFL 1548
               W D   DV+++I D+N  +S E++K V+E +V  P K L+FF W + +  FK D   
Sbjct: 204  NNVWGD---DVEKQIEDLNVGFSSEVVKTVLESLVLEPVKALIFFRWLEESGLFKHDGRT 260

Query: 1547 YDAVVKVLAHSHDFRYIGCMPFWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVEL 1368
            Y+A+ +VL             FW++V +M++ G EME ET+  V+  FCK+++++DAVEL
Sbjct: 261  YNAMARVLGREDLIDR-----FWKLVGDMRSAGFEMEAETFVKVLGRFCKRRMVKDAVEL 315

Query: 1367 YEYKMGSATKPPVQDGVSLFRNVVEWGRELDMRLFSKVVETFTEGGYSLTTSILDEVVKS 1188
            YE+ M  A KP VQ  V L R V   G+ELD  LFS+V++ FT  G  LT S+ + V+KS
Sbjct: 316  YEFAMAGANKPTVQCCVFLLRKVAA-GKELDTDLFSRVLKVFTGNGNVLTDSVANAVLKS 374

Query: 1187 LINVGKVKECGKILKAMEKGGCVPSSELYNKIIYHLATVGG--EAVLMMSEMKASGHIPD 1014
            L +VG+  E  K+LK ME  G V    L +KI Y L   G   +A   M+ ++ SG  P 
Sbjct: 375  LTSVGRTGEWNKVLKEMEDCGFVAGGSLQSKIAYRLGAAGNKEQAHEFMNRIEVSGSNPY 434

Query: 1013 SKTWTSLIFGQCVAGDVKKASDSVRTMVKNFGITDVGPAFEEVVNVFCQQRKTTEAYKFL 834
             KTW SLI G CVAG++ KA +S + +V+  G+   G +F  ++N +CQ  +  +A K L
Sbjct: 435  RKTWESLIQGYCVAGNLDKAFESFKEIVEKEGVASAGYSFNVLMNSYCQMNRAVDASKIL 494

Query: 833  FKTVCEHHLKPQHSTYKMLIWKLLAEGRFNEALILLGLMSGHGFSPFLDPFIDHISKSGS 654
             + V E  LKP HSTYK+L+ KLL +G F +AL +LGLM  HGF PF DPFI+H+SKSGS
Sbjct: 495  CRLVNEKQLKPWHSTYKLLVTKLLVQGGFTDALNILGLMRTHGFPPFTDPFIEHLSKSGS 554

Query: 653  GDDAISFLNAVTNKKFPSTSVVLCMIEAFLKVGRHSEARDFFSKCPSYVRNRADVLKLF 477
            GDDA+ FL A+T+K+FPSTS+ L M EAF K  RH EA++F SKCP Y+RN ADVL LF
Sbjct: 555  GDDAVLFLKAMTSKRFPSTSMFLRMFEAFFKHRRHEEAQNFLSKCPRYIRNHADVLNLF 613


>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Glycine max]
          Length = 628

 Score =  429 bits (1102), Expect = e-117
 Identities = 253/599 (42%), Positives = 358/599 (59%), Gaps = 2/599 (0%)
 Frame = -3

Query: 2267 SNKFILSPRRSCNYFSTESVLEQNKEDDHVLAVLTDILSKSTSNDEIKTAIKSNHVLVTP 2088
            ++ F L+P  S  +FS+E VL Q  + D++L V  DI SK   +++ KT + SN V++T 
Sbjct: 38   NSTFQLNP--SFRHFSSEPVLAQ-ADTDNLLVV--DIFSKPADSEDFKTLLDSNRVMITH 92

Query: 2087 KLVFSTLNSLQGDVETARKFFHFVDETGNERMLTFNCYYLMLGILGTSGKEYVHEFWRLL 1908
              V + L  L  +VE AR+FF +V E   ER L+  CY  ML +LGT+G   VHEFW L+
Sbjct: 93   DAVLAVLWKLDSNVEAARRFFLWVSENHPER-LSSKCYNSMLRVLGTNG--VVHEFWDLV 149

Query: 1907 QVMXXXXXXXXXXXTYDKVADSFQXXXXXXXXXXXXGMYSNSQAENSMKQVASRISNVIN 1728
             VM             + V +SF+            G+Y N   +N      + +  ++ 
Sbjct: 150  DVMKKKGYGVSKGVK-EIVLESFEKGGMVADVAKLKGLYDNLNEKN-----IAIVCRIVR 203

Query: 1727 EKYWFDFPSDVQQKILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDCFL 1548
               W D   DV+++I D+N  +S +++KMV+E +   P K L+FF W + +  FK D   
Sbjct: 204  NNVWDD---DVERQIKDLNVGFSGDVVKMVLESLASEPAKALIFFRWLEESGMFKQDGAT 260

Query: 1547 YDAVVKVLAHSHDFRYIGCMPFWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVEL 1368
            Y+A+ +VL             FW++V +M+  G EME ET+  V+  FCK+++++DAVEL
Sbjct: 261  YNAMARVLGREDSIDR-----FWKLVGDMRNAGFEMEFETFVKVLGRFCKRRMVKDAVEL 315

Query: 1367 YEYKMGSATKPPVQDGVSLFRNVVEWGRELDMRLFSKVVETFTEGGYSLTTSILDEVVKS 1188
            YE+ M    KP VQ  V L R V   G+ELDM LF +V++ FT  G  LT S+ D V+K+
Sbjct: 316  YEFAMTGVNKPTVQCCVFLLRKVAA-GKELDMDLFLRVLKVFTGSGNLLTDSMADAVLKT 374

Query: 1187 LINVGKVKECGKILKAMEKGGCVPSSELYNKIIYHLATVGG--EAVLMMSEMKASGHIPD 1014
            L +VG+  E  K+LK ME  GC   + L +KI Y L   G   +A   M+ ++AS   PD
Sbjct: 375  LTSVGRTGEWNKVLKEMEIVGCCRCN-LQSKIAYRLGAAGNKEQAHEFMNRIEASRSSPD 433

Query: 1013 SKTWTSLIFGQCVAGDVKKASDSVRTMVKNFGITDVGPAFEEVVNVFCQQRKTTEAYKFL 834
             KTW SLI G CVAG++ KA +S + +V+  G+   G +F+ ++N +CQ  +  +A K L
Sbjct: 434  RKTWDSLIEGHCVAGNLDKAFESFKEIVEKEGVASAGYSFDVLMNSYCQMNRAVDASKIL 493

Query: 833  FKTVCEHHLKPQHSTYKMLIWKLLAEGRFNEALILLGLMSGHGFSPFLDPFIDHISKSGS 654
             + V E  LKP HSTYK+L+ KLL +G F +AL +LGLM   GF PF DPFI+H+SKSGS
Sbjct: 494  CRLVNEKKLKPWHSTYKLLVTKLLVQGGFTDALNILGLMRTLGFPPFTDPFIEHLSKSGS 553

Query: 653  GDDAISFLNAVTNKKFPSTSVVLCMIEAFLKVGRHSEARDFFSKCPSYVRNRADVLKLF 477
            G+ A  FL A+T+K+FPSTS+ LCM EAF K GRH EA++F SKCP Y+RN ADVL LF
Sbjct: 554  GNAAALFLKAMTSKRFPSTSMFLCMFEAFFKNGRHEEAQNFLSKCPRYIRNHADVLNLF 612


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  428 bits (1101), Expect = e-117
 Identities = 248/586 (42%), Positives = 365/586 (62%), Gaps = 3/586 (0%)
 Frame = -3

Query: 2225 FSTESVLEQNKEDDHVLAVLTDILSKSTSNDEIKTAIKSNHVLVTPKLVFSTLNSLQGDV 2046
            FS++  LE +K  DHV  V TDI SK    DEIK  ++S+ ++V+ +LV   L +L+ + 
Sbjct: 70   FSSDLALE-DKGLDHV--VFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVLENLESNP 126

Query: 2045 ETARKFFHFVDETGNERMLTFNCYYLMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXXXX 1866
            E AR  F +V    +ER L+   Y LMLGILG++G  +V EFW L++VM           
Sbjct: 127  EVARSVFDWVLRAESER-LSSKSYNLMLGILGSNG--FVSEFWDLVEVMKKKGYGVSKAA 183

Query: 1865 TYDKVADSFQXXXXXXXXXXXXGMYSNSQAENSMKQVASRISNVINEKYWFDFPSDVQQK 1686
             Y K  ++F+            G++++   ++S++++ SR+S +I  + W D   +V+ +
Sbjct: 184  -YVKALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSRVSKIIRSEVWGD---NVEGQ 239

Query: 1685 ILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDCFLYDAVVKVLAHSHDF 1506
            + ++   +S +L+ MV+E +   P K L+FF W + +   K D   Y+A+++VL      
Sbjct: 240  LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLRVLGRED-- 297

Query: 1505 RYIGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMGSATKPPV 1329
                C+  FW++  EM+  G+EME+ TY  V+  F K+++I++ V+LYE+ M  A KP +
Sbjct: 298  ----CIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEFAMSGANKPSM 353

Query: 1328 QDGVSLFRNVVEWGRELDMRLFSKVVETFTEGGYSLTTSILDEVVKSLINVGKVKECGKI 1149
             D   L R +V   + LD+ LFS+VV T+TEGG  LT S+LD ++KSL +VG+  EC K+
Sbjct: 354  YDCTFLLRKIVV-SKVLDISLFSRVVRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKL 412

Query: 1148 LKAMEKGGCVPSSELYNKIIYHLATVG--GEAVLMMSEMKASGHIPDSKTWTSLIFGQCV 975
            LKAME+GG V  S + NKI + L++     EA   M+ M+ S   P+ +TW+SLI G CV
Sbjct: 413  LKAMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCV 472

Query: 974  AGDVKKASDSVRTMVKNFGITDVGPAFEEVVNVFCQQRKTTEAYKFLFKTVCEHHLKPQH 795
            AGD+ KASD  + MV+  G++  G AFE +VN +C + ++ +A   L     +   KP H
Sbjct: 473  AGDLDKASDCFQKMVEKEGVSYAGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWH 532

Query: 794  STYKMLIWKLLAEGRFNEALILLGLMSGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTN 615
            STYK+LI KLL +G F  AL LLGLM  H F PFLDPFI+++S++G+GDDAI+FL A+T 
Sbjct: 533  STYKLLISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTV 592

Query: 614  KKFPSTSVVLCMIEAFLKVGRHSEARDFFSKCPSYVRNRADVLKLF 477
            K+FPSTSV L   EAF K GRH+EA+DF SKCP Y+RN ADVL LF
Sbjct: 593  KRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLF 638


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  428 bits (1101), Expect = e-117
 Identities = 249/586 (42%), Positives = 363/586 (61%), Gaps = 3/586 (0%)
 Frame = -3

Query: 2225 FSTESVLEQNKEDDHVLAVLTDILSKSTSNDEIKTAIKSNHVLVTPKLVFSTLNSLQGDV 2046
            FS++  LE +K  DHV  V TDI SK    DEIK  ++S+ ++V+ +LV   L +L+ + 
Sbjct: 70   FSSDLALE-DKGLDHV--VFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVLENLESNP 126

Query: 2045 ETARKFFHFVDETGNERMLTFNCYYLMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXXXX 1866
            E AR  F +V    +ER L+   Y LMLGILG++G  +V EFW L++VM           
Sbjct: 127  EVARXVFDWVLRAESER-LSSKSYNLMLGILGSNG--FVSEFWDLVEVMKKKGYGVSKAA 183

Query: 1865 TYDKVADSFQXXXXXXXXXXXXGMYSNSQAENSMKQVASRISNVINEKYWFDFPSDVQQK 1686
             Y K  ++F+            G++++   +NS++++ SR+S +I  + W D   +V+ +
Sbjct: 184  -YVKALENFEKEALGSDLEKLRGLFASGSVDNSIQKICSRVSKIIRSEVWGD---NVEGQ 239

Query: 1685 ILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDCFLYDAVVKVLAHSHDF 1506
            + ++   +S +L+ MV+E +   P K L+FF W + +   K D   Y+A+++VL      
Sbjct: 240  LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLXKHDKXTYNAMLRVLGRED-- 297

Query: 1505 RYIGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMGSATKPPV 1329
                C+  FW++  EM+  G+EME+ TY  V+  F K+++I + V+LYE+ M  A KP +
Sbjct: 298  ----CIERFWKVADEMRNAGYEMEVATYXKVVGRFYKRKMIXEVVDLYEFAMSGANKPSM 353

Query: 1328 QDGVSLFRNVVEWGRELDMRLFSKVVETFTEGGYSLTTSILDEVVKSLINVGKVKECGKI 1149
             D   L R +V   + LD+ LFS+VV T+TEGG  LT S+LD  +KSL +VG+  EC K+
Sbjct: 354  YDCTFLLRKIVV-SKVLDISLFSRVVRTYTEGGNILTKSMLDAXLKSLTSVGRFGECNKL 412

Query: 1148 LKAMEKGGCVPSSELYNKIIYHLATVG--GEAVLMMSEMKASGHIPDSKTWTSLIFGQCV 975
            LKAME+GG V  S + NKI + L++     EA   M+ M+ S   P+ +TW+SLI G CV
Sbjct: 413  LKAMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCV 472

Query: 974  AGDVKKASDSVRTMVKNFGITDVGPAFEEVVNVFCQQRKTTEAYKFLFKTVCEHHLKPQH 795
            AGD+ KASD  + MV+  G++  G AFE +VN +C + ++ +A   L     +   KP H
Sbjct: 473  AGDLDKASDCFQKMVEKEGVSYXGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWH 532

Query: 794  STYKMLIWKLLAEGRFNEALILLGLMSGHGFSPFLDPFIDHISKSGSGDDAISFLNAVTN 615
            STYK+LI KLL +G F  AL LLGLM  H F PFLDPFI+++S++G+GDDAI+FL A+T 
Sbjct: 533  STYKLLISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTV 592

Query: 614  KKFPSTSVVLCMIEAFLKVGRHSEARDFFSKCPSYVRNRADVLKLF 477
            K+FPSTSV L   EAF K GRH+EA+DF SKCP Y+RN ADVL LF
Sbjct: 593  KRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLF 638


>ref|XP_002305302.1| predicted protein [Populus trichocarpa] gi|222848266|gb|EEE85813.1|
            predicted protein [Populus trichocarpa]
          Length = 616

 Score =  414 bits (1065), Expect = e-113
 Identities = 239/588 (40%), Positives = 350/588 (59%), Gaps = 3/588 (0%)
 Frame = -3

Query: 2231 NYFSTESVLEQNKEDDHVLAVLTDILSKSTSNDEIKTAIKSNHVLVTPKLVFSTLNSLQG 2052
            N+ S  S++E  K+ DHVL V  D  +K    D+I   ++ N V+++  LV   L SL+ 
Sbjct: 40   NFSSEASLVEPTKDPDHVLLVC-DAFTKFDEFDDISKELELNSVVISHDLVLKVLKSLES 98

Query: 2051 DVETARKFFHFVDETGNERMLTFNCYYLMLGILGTSGKEYVHEFWRLLQVMXXXXXXXXX 1872
              E A++FF +V E  + R L+   Y  MLGILG +G   V EFW L+  M         
Sbjct: 99   KPEVAKRFFDWVLEKDSGR-LSSKSYNWMLGILGVNG--LVVEFWDLVDKMKIKGHGVSG 155

Query: 1871 XXTYDKVADSFQXXXXXXXXXXXXGMYSNSQAENSMKQVASRISNVINEKYWFDFPSDVQ 1692
                D+V + F+            G+++    +NS++++  R+S ++  K W +   DV+
Sbjct: 156  VTR-DRVQEKFEKEGLNDDLEKLKGVFAKGSVDNSVEKIGLRVSRIVRNKVWGE---DVE 211

Query: 1691 QKILDINCIWSPELIKMVVEKVVGNPRKILLFFWWFQVTFSFKPDCFLYDAVVKVLAHSH 1512
             +I  +   +S +L+K+V+E +V  P K L+FF W + +   K D   Y+A+ +VL    
Sbjct: 212  GEIKHLCAEFSSDLVKIVLEHLVMEPVKALIFFRWVEDSELCKHDGRSYNAMARVLGRED 271

Query: 1511 DFRYIGCMP-FWRIVVEMKACGHEMEMETYSFVMLLFCKKQLIEDAVELYEYKMGSATKP 1335
                  C+  FW+++ EM++ G EME  T+  V+  F  +++I++A++LYE+ M  A KP
Sbjct: 272  ------CIDRFWKVIDEMRSNGFEMETGTFDTVLARFMSRKMIKEAIDLYEFAMTGANKP 325

Query: 1334 PVQDGVSLFRNVVEWGRELDMRLFSKVVETFTEGGYSLTTSILDEVVKSLINVGKVKECG 1155
              +    L R +V  G++LDM LFS+VVE FT  G  LT ++LD V+K+L NVGK  EC 
Sbjct: 326  SAKCCTYLLRKIVV-GKQLDMGLFSRVVEIFTGHGNVLTDAMLDAVLKALTNVGKFGECN 384

Query: 1154 KILKAMEKGGCVPSSELYNKIIYHLATVG--GEAVLMMSEMKASGHIPDSKTWTSLIFGQ 981
            K+L+ M+  G V S  L  KI + L + G   EA   ++ M++SG     K W SLI G 
Sbjct: 385  KVLREMKVAGFVASGNLQRKIAFGLTSAGKNDEANEFVNHMESSGRDLSYKAWASLIEGH 444

Query: 980  CVAGDVKKASDSVRTMVKNFGITDVGPAFEEVVNVFCQQRKTTEAYKFLFKTVCEHHLKP 801
            CV+GD++KASD  + MV+  G++  G A E +VN +C + +  +A   L   VC++HL P
Sbjct: 445  CVSGDLEKASDCFKIMVEKKGVSGAGYAVELLVNAYCLKNRAMDACNLLCDYVCQNHLCP 504

Query: 800  QHSTYKMLIWKLLAEGRFNEALILLGLMSGHGFSPFLDPFIDHISKSGSGDDAISFLNAV 621
              +TYK+LI KLL +G F +AL LLGLM  HG  PF+DPF + +SKSG+GDDAI+F+NA+
Sbjct: 505  WQTTYKVLISKLLVQGAFKDALNLLGLMQSHGIPPFIDPFFEFVSKSGTGDDAIAFMNAM 564

Query: 620  TNKKFPSTSVVLCMIEAFLKVGRHSEARDFFSKCPSYVRNRADVLKLF 477
            T KKFPS SV L M +AF K  RH EA+DF SKCP Y+RNRADVL LF
Sbjct: 565  TTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPIYIRNRADVLNLF 612