BLASTX nr result

ID: Coptis21_contig00016502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016502
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine...   110   9e-23
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   110   9e-23
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22

>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
            predicted protein [Populus trichocarpa]
          Length = 1034

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/80 (62%), Positives = 66/80 (82%)
 Frame = +3

Query: 6    HQRLNIAIDVASALNYLHH*C*VSIIHRDLKPSNVLLDNDMVAHVSDFGLAKLLSGSVEN 185
            HQRLNIAIDVA+ALNYLH+ C   ++H DLKPSNVLLDNDM AHV DFGLA+ +  ++  
Sbjct: 822  HQRLNIAIDVAAALNYLHYQCHKPVVHCDLKPSNVLLDNDMTAHVGDFGLARFIEEAINP 881

Query: 186  PYNSQSASIGVKGSIGYAAP 245
             + ++S+S+G+KG++GYAAP
Sbjct: 882  SHRNESSSVGLKGTVGYAAP 901


>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Vitis vinifera]
          Length = 1040

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +3

Query: 9    QRLNIAIDVASALNYLHH*C*VSIIHRDLKPSNVLLDNDMVAHVSDFGLAKLLSGSVENP 188
            QRLNIAIDVASAL+YLHH C   I+H DLKPSN+LLDNDM AHV DFGLA+ +  +    
Sbjct: 824  QRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNILLDNDMTAHVGDFGLARFIPEAAGRS 883

Query: 189  YNSQSASIGVKGSIGYAAP 245
            + SQS+SIG+KG+IGYAAP
Sbjct: 884  HPSQSSSIGLKGTIGYAAP 902


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +3

Query: 9    QRLNIAIDVASALNYLHH*C*VSIIHRDLKPSNVLLDNDMVAHVSDFGLAKLLSGSVENP 188
            QRLNIAIDVASAL+YLHH C   I+H DLKPSN+LLDNDM AHV DFGLA+ +  +    
Sbjct: 855  QRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNILLDNDMTAHVGDFGLARFIPEAAGRS 914

Query: 189  YNSQSASIGVKGSIGYAAP 245
            + SQS+SIG+KG+IGYAAP
Sbjct: 915  HPSQSSSIGLKGTIGYAAP 933


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/79 (65%), Positives = 66/79 (83%)
 Frame = +3

Query: 9    QRLNIAIDVASALNYLHH*C*VSIIHRDLKPSNVLLDNDMVAHVSDFGLAKLLSGSVENP 188
            QRLNIAIDVASAL+YLH+ C ++++H DLKPSNVLLD D+ AHV DFGLA+LL+ +   P
Sbjct: 817  QRLNIAIDVASALDYLHNHCQIAVVHCDLKPSNVLLDGDLTAHVGDFGLARLLTQASHQP 876

Query: 189  YNSQSASIGVKGSIGYAAP 245
               Q++SIG+KG+IGYAAP
Sbjct: 877  GLDQTSSIGLKGTIGYAAP 895


>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
           predicted protein [Populus trichocarpa]
          Length = 970

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/79 (68%), Positives = 63/79 (79%)
 Frame = +3

Query: 9   QRLNIAIDVASALNYLHH*C*VSIIHRDLKPSNVLLDNDMVAHVSDFGLAKLLSGSVENP 188
           QRLNIAIDVASAL+YLHH C  +I+H DLKPSNVLLD+DM AHV DF LAK LS + +NP
Sbjct: 741 QRLNIAIDVASALDYLHHQCKTTIVHCDLKPSNVLLDDDMTAHVGDFELAKFLSEASKNP 800

Query: 189 YNSQSASIGVKGSIGYAAP 245
             +QS S+ +KGSIGY  P
Sbjct: 801 SINQSISVALKGSIGYIPP 819


Top