BLASTX nr result

ID: Coptis21_contig00016496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016496
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634206.1| PREDICTED: thaumatin-like protein-like [Viti...   408   e-111
emb|CAN59843.1| hypothetical protein VITISV_030359 [Vitis vinifera]   407   e-111
ref|XP_004137499.1| PREDICTED: thaumatin-like protein-like [Cucu...   404   e-110
ref|XP_002317878.1| predicted protein [Populus trichocarpa] gi|2...   390   e-106
ref|XP_002532822.1| Protein P21, putative [Ricinus communis] gi|...   389   e-106

>ref|XP_003634206.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera]
           gi|297734316|emb|CBI15563.3| unnamed protein product
           [Vitis vinifera]
          Length = 244

 Score =  408 bits (1048), Expect = e-111
 Identities = 186/230 (80%), Positives = 206/230 (89%), Gaps = 2/230 (0%)
 Frame = +3

Query: 291 TNLSVEVSATTIALYNKCPHPVWPGIQPGAGRPILAKGGFKLNPKQAYSLRVPAEWSGRI 470
           T ++ EVSATTI+LYNKC HPVWPGIQPGAG+PILA+GGFKL P +AYSL +PA WSGRI
Sbjct: 15  TCIAGEVSATTISLYNKCSHPVWPGIQPGAGKPILARGGFKLPPNKAYSLHIPAAWSGRI 74

Query: 471 WGRRDCVFDASGRGHCATGDCGGSLYCNGLGGEPPATLAEITLGA-QDFYDVSLVDGYNL 647
           WGR  C FDA GRG CATGDCGGSL+CNG+GG PPATLAEITLG+ QDFYDVSLVDGYNL
Sbjct: 75  WGRHGCSFDAHGRGRCATGDCGGSLFCNGMGGTPPATLAEITLGSEQDFYDVSLVDGYNL 134

Query: 648 AISITPFKGKGRCSYAGCVSDLNEMCPVGLQVKGHNN-AVVACKSACFAFKSPKYCCTGL 824
           AISITPFKG G+CSYAGCVSDLN MCPVGLQV+ H+N  VVACKSAC AF SP+YCCTG 
Sbjct: 135 AISITPFKGSGKCSYAGCVSDLNTMCPVGLQVRSHDNRRVVACKSACSAFNSPRYCCTGS 194

Query: 825 YGNPQSCKPTAYSRIFKTACPRAYSYAYDDPTSIATCSGASYLVTYCPHH 974
           +G+PQSCKPTAYS+IFK ACPRAYSYAYDDPTSIATC+G +YLVT+CPHH
Sbjct: 195 FGSPQSCKPTAYSKIFKAACPRAYSYAYDDPTSIATCTGGNYLVTFCPHH 244


>emb|CAN59843.1| hypothetical protein VITISV_030359 [Vitis vinifera]
          Length = 243

 Score =  407 bits (1046), Expect = e-111
 Identities = 185/225 (82%), Positives = 203/225 (90%), Gaps = 2/225 (0%)
 Frame = +3

Query: 306 EVSATTIALYNKCPHPVWPGIQPGAGRPILAKGGFKLNPKQAYSLRVPAEWSGRIWGRRD 485
           EVSATTI+LYNKC HPVWPGIQPGAG+PILA+GGFKL P +AYSL +PA WSGRIWGR  
Sbjct: 19  EVSATTISLYNKCSHPVWPGIQPGAGKPILARGGFKLPPNKAYSLHIPAAWSGRIWGRHG 78

Query: 486 CVFDASGRGHCATGDCGGSLYCNGLGGEPPATLAEITLGA-QDFYDVSLVDGYNLAISIT 662
           C FDA GRG CATGDCGGSL+CNG+GG PPATLAEITLG+ QDFYDVSLVDGYNLAISIT
Sbjct: 79  CSFDAHGRGRCATGDCGGSLFCNGMGGTPPATLAEITLGSEQDFYDVSLVDGYNLAISIT 138

Query: 663 PFKGKGRCSYAGCVSDLNEMCPVGLQVKGHNN-AVVACKSACFAFKSPKYCCTGLYGNPQ 839
           PFKG G+CSYAGCVSDLN MCPVGLQV+ H+N  VVACKSAC AF SP+YCCTG +G+PQ
Sbjct: 139 PFKGSGKCSYAGCVSDLNTMCPVGLQVRSHDNRRVVACKSACSAFNSPRYCCTGSFGSPQ 198

Query: 840 SCKPTAYSRIFKTACPRAYSYAYDDPTSIATCSGASYLVTYCPHH 974
           SCKPTAYS+IFK ACPRAYSYAYDDPTSIATC+G +YLVT+CPHH
Sbjct: 199 SCKPTAYSKIFKAACPRAYSYAYDDPTSIATCTGGNYLVTFCPHH 243


>ref|XP_004137499.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus]
           gi|449510943|ref|XP_004163817.1| PREDICTED:
           thaumatin-like protein-like [Cucumis sativus]
          Length = 250

 Score =  404 bits (1037), Expect = e-110
 Identities = 183/232 (78%), Positives = 206/232 (88%), Gaps = 2/232 (0%)
 Frame = +3

Query: 285 FFTNLSVEVSATTIALYNKCPHPVWPGIQPGAGRPILAKGGFKLNPKQAYSLRVPAEWSG 464
           F +++SV VSATTI  YNKC HPVWPGIQP AG+P+LA+GGFKL P ++Y+L++PA WSG
Sbjct: 18  FTSHISVLVSATTITFYNKCSHPVWPGIQPSAGKPLLARGGFKLPPNKSYNLQLPALWSG 77

Query: 465 RIWGRRDCVFDASGRGHCATGDCGGSLYCNGLGGEPPATLAEITLG-AQDFYDVSLVDGY 641
           R WGR  C FDASGRG CATGDCGGSL+CNG+GG PPATLAEITLG  QDFYDVSLVDGY
Sbjct: 78  RFWGRHGCAFDASGRGKCATGDCGGSLFCNGIGGTPPATLAEITLGNDQDFYDVSLVDGY 137

Query: 642 NLAISITPFKGKGRCSYAGCVSDLNEMCPVGLQVKGHNN-AVVACKSACFAFKSPKYCCT 818
           NLAISITP KG G+CSYAGCVSDLN MCPVGLQV+ H+N  VVACKSACFAF SP+YCCT
Sbjct: 138 NLAISITPSKGSGKCSYAGCVSDLNMMCPVGLQVRSHDNRRVVACKSACFAFNSPRYCCT 197

Query: 819 GLYGNPQSCKPTAYSRIFKTACPRAYSYAYDDPTSIATCSGASYLVTYCPHH 974
           G +GNPQSCKPTAYS+IFKTACP+AYSYAYDDPTSIATC+G +YLVT+CPHH
Sbjct: 198 GRFGNPQSCKPTAYSKIFKTACPKAYSYAYDDPTSIATCTGGNYLVTFCPHH 249


>ref|XP_002317878.1| predicted protein [Populus trichocarpa] gi|222858551|gb|EEE96098.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  390 bits (1001), Expect = e-106
 Identities = 182/247 (73%), Positives = 206/247 (83%), Gaps = 2/247 (0%)
 Frame = +3

Query: 237 MEVMLMKPXXXXXXISFFTNLSVEVSATTIALYNKCPHPVWPGIQPGAGRPILAKGGFKL 416
           M  ML          S F+++S EVS+TTI L+NKC HPVWPGIQP AG+PILA+GGFKL
Sbjct: 1   MAAMLRSLLALLLFTSIFSHIS-EVSSTTITLHNKCTHPVWPGIQPSAGKPILARGGFKL 59

Query: 417 NPKQAYSLRVPAEWSGRIWGRRDCVFDASGRGHCATGDCGGSLYCNGLGGEPPATLAEIT 596
            P +AY+L +P  WSGR+WGR  C FDASGRG CATGDCGGSLYCNG+GG PPATLAEIT
Sbjct: 60  PPNKAYTLHIPPLWSGRLWGRHGCSFDASGRGRCATGDCGGSLYCNGIGGTPPATLAEIT 119

Query: 597 LG-AQDFYDVSLVDGYNLAISITPFKGKGRCSYAGCVSDLNEMCPVGLQVKGHNN-AVVA 770
           LG  QDFYDVSLVDGYNLAISITPFKG G+CSYAGCVSDLN MCP+GLQV+  +N +VVA
Sbjct: 120 LGNEQDFYDVSLVDGYNLAISITPFKGSGKCSYAGCVSDLNLMCPLGLQVRSKDNRSVVA 179

Query: 771 CKSACFAFKSPKYCCTGLYGNPQSCKPTAYSRIFKTACPRAYSYAYDDPTSIATCSGASY 950
           CKSACFAF SP+YCCTG +G PQ+CKPTAYSRIFK ACP+AYSYAYDDPTSIATC+  +Y
Sbjct: 180 CKSACFAFNSPRYCCTGRFGTPQACKPTAYSRIFKAACPKAYSYAYDDPTSIATCTRGNY 239

Query: 951 LVTYCPH 971
           LVT+C H
Sbjct: 240 LVTFCHH 246


>ref|XP_002532822.1| Protein P21, putative [Ricinus communis]
           gi|223527423|gb|EEF29561.1| Protein P21, putative
           [Ricinus communis]
          Length = 248

 Score =  389 bits (1000), Expect = e-106
 Identities = 178/231 (77%), Positives = 202/231 (87%), Gaps = 2/231 (0%)
 Frame = +3

Query: 288 FTNLSVEVSATTIALYNKCPHPVWPGIQPGAGRPILAKGGFKLNPKQAYSLRVPAEWSGR 467
           F+++S EVS+TTI LYNKC HPVWPGIQP AG+P+LA+GGFKL P +AYSL++P  WSGR
Sbjct: 18  FSHIS-EVSSTTITLYNKCTHPVWPGIQPSAGKPLLARGGFKLPPNKAYSLKLPPLWSGR 76

Query: 468 IWGRRDCVFDASGRGHCATGDCGGSLYCNGLGGEPPATLAEITLG-AQDFYDVSLVDGYN 644
            WGR  C FD SGRG CATGDCGG+L+CNG+GG PPATLAEITLG  QDFYDVSLVDGYN
Sbjct: 77  FWGRHGCSFDGSGRGRCATGDCGGALFCNGIGGTPPATLAEITLGNDQDFYDVSLVDGYN 136

Query: 645 LAISITPFKGKGRCSYAGCVSDLNEMCPVGLQVKGHNN-AVVACKSACFAFKSPKYCCTG 821
           LA+SITPFKG G+CSYAGCVSDLN MCPVGLQV+  +N  VVACKSAC AF SP+YCCTG
Sbjct: 137 LAMSITPFKGSGKCSYAGCVSDLNLMCPVGLQVRSKDNRRVVACKSACSAFNSPRYCCTG 196

Query: 822 LYGNPQSCKPTAYSRIFKTACPRAYSYAYDDPTSIATCSGASYLVTYCPHH 974
            +GNPQSCKPTAYS+IFK ACP+AYSYAYDDPTSIATC+  +YLVT+CPHH
Sbjct: 197 KFGNPQSCKPTAYSKIFKAACPKAYSYAYDDPTSIATCTRGNYLVTFCPHH 247


Top