BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016485
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|2...   294   1e-77
ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containi...   289   3e-76
emb|CBI38708.3| unnamed protein product [Vitis vinifera]              288   5e-76
ref|XP_002515072.1| pentatricopeptide repeat-containing protein,...   280   2e-73
ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi...   271   9e-71

>ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|222843166|gb|EEE80713.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  294 bits (752), Expect = 1e-77
 Identities = 139/227 (61%), Positives = 183/227 (80%)
 Frame = -2

Query: 681 LLQIMVRESDFQTAHELYMDNSTGWEVKNQTRSINLFIELLCRNNHSDLALDIFQEMNNM 502
           LLQI+V+ES  +TAH  +++NS GWEVK++ R++NL +++LC+ N SDLAL IFQEM+  
Sbjct: 121 LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQ 180

Query: 501 CCYPDRDTYKLLMRGLCQDKRLNEATHVLYSMFWRISQKGSGEDIVVYRTLLEALCDNGH 322
            CYP+RD+Y++LMRGLC+D RLNEATH+LYSMFWRISQKGSGEDIVVYRTLL+ALCDNG 
Sbjct: 181 GCYPNRDSYRILMRGLCEDGRLNEATHLLYSMFWRISQKGSGEDIVVYRTLLDALCDNGQ 240

Query: 321 LEEAVQFLGKVLRKGLKTPKQRLQGFTLTRFL*IENVEGIKGLINEALIKGAVPSLVSYS 142
           +EEA++ LGK+LRKGLK PK+      L++    E++E  K LINEALI+G VPSL SY+
Sbjct: 241 VEEAMEILGKILRKGLKAPKRYRHRLDLSQCNNCEDIEATKLLINEALIRGGVPSLASYT 300

Query: 141 AMAIDLYSQGRIDDANRVFDEMRGRGFSLSVSMYEAKLEALCREGRA 1
           AMA+DLY +G+   A++V DE + RG+  S+  YEAK+ ALCR+GR+
Sbjct: 301 AMAVDLYCEGKTGQADKVLDETQERGYRPSLRTYEAKVTALCRQGRS 347


>ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Vitis vinifera]
          Length = 503

 Score =  289 bits (740), Expect = 3e-76
 Identities = 140/225 (62%), Positives = 180/225 (80%)
 Frame = -2

Query: 681 LLQIMVRESDFQTAHELYMDNSTGWEVKNQTRSINLFIELLCRNNHSDLALDIFQEMNNM 502
           LL+I+V+ES  +TA  L++++S GWEVK++  S+NL ++ LC+ N SDLAL +FQEM   
Sbjct: 121 LLRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQ 180

Query: 501 CCYPDRDTYKLLMRGLCQDKRLNEATHVLYSMFWRISQKGSGEDIVVYRTLLEALCDNGH 322
           CC PD+++Y++LMRGLC+D RLNEATH+LYSMFWRISQKG GEDI  YRTLL+ALCDNGH
Sbjct: 181 CCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGH 240

Query: 321 LEEAVQFLGKVLRKGLKTPKQRLQGFTLTRFL*IENVEGIKGLINEALIKGAVPSLVSYS 142
           +EEA++ LGKVL+KGLK PK+      L+     E++E  KGLINEALI+G VPS+ SYS
Sbjct: 241 VEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYS 300

Query: 141 AMAIDLYSQGRIDDANRVFDEMRGRGFSLSVSMYEAKLEALCREG 7
           AMAIDLYS+ +I +AN+V DEMR RGF  S+S+YEAK+ ALCR G
Sbjct: 301 AMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCRCG 345



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = -2

Query: 588 RSINLFIELLCRNNHSDLALDIFQEM-NNMCCYPDRDTYKLLMRGLCQDKRLNEATHVLY 412
           R  N+ ++ LCR   S  A+   ++M   + C  D++TY +L+ GLC D R  EA+ +L 
Sbjct: 368 RLYNIVLKGLCREGKSAFAVGYLEKMARQVGCVADKETYSILVDGLCCDGRFVEASGILE 427

Query: 411 SMFWRISQKGSGEDIVVYRTLLEALCDNGHLEEAVQFLGKVLRKG 277
            M  R S  G    +  Y TL+  LC  G   +AV +L +++ +G
Sbjct: 428 RMLIRSSSPG----VETYNTLIRGLCLMGRQYDAVIWLEEMVVQG 468


>emb|CBI38708.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  288 bits (738), Expect = 5e-76
 Identities = 139/223 (62%), Positives = 179/223 (80%)
 Frame = -2

Query: 681 LLQIMVRESDFQTAHELYMDNSTGWEVKNQTRSINLFIELLCRNNHSDLALDIFQEMNNM 502
           LL+I+V+ES  +TA  L++++S GWEVK++  S+NL ++ LC+ N SDLAL +FQEM   
Sbjct: 121 LLRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQ 180

Query: 501 CCYPDRDTYKLLMRGLCQDKRLNEATHVLYSMFWRISQKGSGEDIVVYRTLLEALCDNGH 322
           CC PD+++Y++LMRGLC+D RLNEATH+LYSMFWRISQKG GEDI  YRTLL+ALCDNGH
Sbjct: 181 CCSPDKESYRILMRGLCEDGRLNEATHLLYSMFWRISQKGGGEDIAAYRTLLDALCDNGH 240

Query: 321 LEEAVQFLGKVLRKGLKTPKQRLQGFTLTRFL*IENVEGIKGLINEALIKGAVPSLVSYS 142
           +EEA++ LGKVL+KGLK PK+      L+     E++E  KGLINEALI+G VPS+ SYS
Sbjct: 241 VEEALEILGKVLKKGLKAPKRCRGHLDLSYCCNGEDIERTKGLINEALIRGGVPSMASYS 300

Query: 141 AMAIDLYSQGRIDDANRVFDEMRGRGFSLSVSMYEAKLEALCR 13
           AMAIDLYS+ +I +AN+V DEMR RGF  S+S+YEAK+ ALCR
Sbjct: 301 AMAIDLYSERKIGEANQVLDEMRDRGFKPSLSIYEAKIAALCR 343


>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  280 bits (716), Expect = 2e-73
 Identities = 132/226 (58%), Positives = 179/226 (79%)
 Frame = -2

Query: 681 LLQIMVRESDFQTAHELYMDNSTGWEVKNQTRSINLFIELLCRNNHSDLALDIFQEMNNM 502
           LLQIMV+ES  + AH L++++S GWEVK++ RS+NL +++LC++N SD+AL +FQEMN  
Sbjct: 121 LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQ 180

Query: 501 CCYPDRDTYKLLMRGLCQDKRLNEATHVLYSMFWRISQKGSGEDIVVYRTLLEALCDNGH 322
            CYPDRD+Y+++M GLC+D RLNEATH+LYSMFWRISQKGSGEDIV+YR  L+ALCD G 
Sbjct: 181 GCYPDRDSYRIVMMGLCKDGRLNEATHLLYSMFWRISQKGSGEDIVIYRIFLDALCDIGM 240

Query: 321 LEEAVQFLGKVLRKGLKTPKQRLQGFTLTRFL*IENVEGIKGLINEALIKGAVPSLVSYS 142
           +E+A++ LGK+LRKGLK PK+      L+      N+E  K LINEALI+GA+PSL SY+
Sbjct: 241 VEQALEVLGKILRKGLKAPKRCHPRLDLSNCNSDGNIETTKHLINEALIRGAIPSLSSYT 300

Query: 141 AMAIDLYSQGRIDDANRVFDEMRGRGFSLSVSMYEAKLEALCREGR 4
           AMA+D Y++G++  A++V DE + RGF  S+  YEAK+ ALC+EG+
Sbjct: 301 AMAVDFYAEGKLSQADKVLDETQDRGFRPSLLTYEAKVAALCKEGK 346


>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Glycine max]
          Length = 502

 Score =  271 bits (693), Expect = 9e-71
 Identities = 129/223 (57%), Positives = 178/223 (79%)
 Frame = -2

Query: 681 LLQIMVRESDFQTAHELYMDNSTGWEVKNQTRSINLFIELLCRNNHSDLALDIFQEMNNM 502
           +LQIMV+E+  + AH L++++S GWEV++  R++NL +  LC+ + SDLAL +FQEM+  
Sbjct: 121 MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQ 180

Query: 501 CCYPDRDTYKLLMRGLCQDKRLNEATHVLYSMFWRISQKGSGEDIVVYRTLLEALCDNGH 322
            CYP+RD+Y +LM+GLCQD+RL+EATH+LYSMFWRISQKG+GEDIVVYRTLL+ALCD G 
Sbjct: 181 SCYPNRDSYAILMKGLCQDRRLHEATHLLYSMFWRISQKGNGEDIVVYRTLLDALCDAGK 240

Query: 321 LEEAVQFLGKVLRKGLKTPKQRLQGFTLTRFL*IENVEGIKGLINEALIKGAVPSLVSYS 142
            EEA + LGK+LRKGLK PK+      L +    +++E  K +I+EALIKG+VPSL SY+
Sbjct: 241 FEEAEEILGKILRKGLKAPKRCHSRLDLDQLSDGKDIESAKRMIHEALIKGSVPSLASYN 300

Query: 141 AMAIDLYSQGRIDDANRVFDEMRGRGFSLSVSMYEAKLEALCR 13
           AMA+DLYS+G+ID+A++V  EM+ RGF  + S++EAK+ ALC+
Sbjct: 301 AMAVDLYSEGKIDEADKVIIEMQVRGFKPTHSIFEAKVAALCK 343