BLASTX nr result

ID: Coptis21_contig00016468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016468
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518437.1| proline synthetase associated protein, putat...   154   7e-36
ref|XP_002331519.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002889904.1| alanine racemase family protein [Arabidopsis...   152   4e-35
ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed b...   150   1e-34
emb|CBI23205.3| unnamed protein product [Vitis vinifera]              150   1e-34

>ref|XP_002518437.1| proline synthetase associated protein, putative [Ricinus communis]
           gi|223542282|gb|EEF43824.1| proline synthetase
           associated protein, putative [Ricinus communis]
          Length = 270

 Score =  154 bits (389), Expect = 7e-36
 Identities = 71/86 (82%), Positives = 81/86 (94%)
 Frame = +1

Query: 1   VSKTKPVSIINQVYQIGHRCFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAV 180
           VSKTKPVS+I+QVY  GHRCFGENYVQE++EKAPQLP+D+EWHFIGNLQSNKVKPLLAAV
Sbjct: 67  VSKTKPVSLIHQVYDAGHRCFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKVKPLLAAV 126

Query: 181 PNLAMVESVDDEKIANRLDRVVASIG 258
           PNLA+VESVDD+KIAN LDR V ++G
Sbjct: 127 PNLAVVESVDDQKIANHLDRAVGNLG 152


>ref|XP_002331519.1| predicted protein [Populus trichocarpa] gi|222873743|gb|EEF10874.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/86 (82%), Positives = 78/86 (90%)
 Frame = +1

Query: 1   VSKTKPVSIINQVYQIGHRCFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAV 180
           VSKTKPVS+I QVY +GHRCFGENY QE IEKAPQLP+D+EWHFIGNLQSNKVKPLLA+V
Sbjct: 35  VSKTKPVSLIKQVYDVGHRCFGENYAQEFIEKAPQLPEDIEWHFIGNLQSNKVKPLLASV 94

Query: 181 PNLAMVESVDDEKIANRLDRVVASIG 258
           PNL MVESVDDEKIAN LDR V ++G
Sbjct: 95  PNLDMVESVDDEKIANHLDRAVGNLG 120


>ref|XP_002889904.1| alanine racemase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335746|gb|EFH66163.1| alanine racemase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/86 (84%), Positives = 78/86 (90%)
 Frame = +1

Query: 1   VSKTKPVSIINQVYQIGHRCFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAV 180
           VSKTKPVS+I QVY  GHR FGENYVQEIIEK+PQLPDD+EWHFIGNLQSNKVKPLL+ V
Sbjct: 38  VSKTKPVSLIRQVYDAGHRSFGENYVQEIIEKSPQLPDDIEWHFIGNLQSNKVKPLLSGV 97

Query: 181 PNLAMVESVDDEKIANRLDRVVASIG 258
           PNL MVESVDDEKIAN LDRVV +IG
Sbjct: 98  PNLVMVESVDDEKIANMLDRVVGNIG 123


>ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed bacterial homolog
           protein-like [Vitis vinifera]
          Length = 264

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = +1

Query: 1   VSKTKPVSIINQVYQIGHRCFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAV 180
           VSKTK VS+I +VY  GHRCFGENYVQEIIEKAPQLP+D+EWHFIGNLQSNKVKPLL  V
Sbjct: 59  VSKTKSVSLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGV 118

Query: 181 PNLAMVESVDDEKIANRLDRVVASIG 258
           PNLA+VE+VDDEKIA+RLDR+VA+IG
Sbjct: 119 PNLAVVETVDDEKIADRLDRMVATIG 144


>emb|CBI23205.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = +1

Query: 1   VSKTKPVSIINQVYQIGHRCFGENYVQEIIEKAPQLPDDMEWHFIGNLQSNKVKPLLAAV 180
           VSKTK VS+I +VY  GHRCFGENYVQEIIEKAPQLP+D+EWHFIGNLQSNKVKPLL  V
Sbjct: 106 VSKTKSVSLIREVYDSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGV 165

Query: 181 PNLAMVESVDDEKIANRLDRVVASIG 258
           PNLA+VE+VDDEKIA+RLDR+VA+IG
Sbjct: 166 PNLAVVETVDDEKIADRLDRMVATIG 191


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