BLASTX nr result

ID: Coptis21_contig00016467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016467
         (1412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158096.1| PREDICTED: uncharacterized protein LOC101226...    63   2e-07
ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-06

>ref|XP_004158096.1| PREDICTED: uncharacterized protein LOC101226968 [Cucumis sativus]
          Length = 439

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
 Frame = -1

Query: 1226 DVSSSNRFYKIFIMMSVVLILALATKRLVIGITLSAFLLFFIEFCCNYLISFLKSCINGC 1047
            D +S N F    + M VV +LAL+ K+LV+GITLSAFLLF +EF    ++ F K CI+G 
Sbjct: 129  DAASGNGFCLFVLKMFVVAVLALSAKKLVVGITLSAFLLFLLEFLGTRIVRFFKPCIHGE 188

Query: 1046 KGF-----MVSVHLEKGKN 1005
                     VS HL  GK+
Sbjct: 189  AALRSLIQKVSKHLWIGKD 207


>ref|XP_002330556.1| predicted protein [Populus trichocarpa] gi|222872114|gb|EEF09245.1|
            predicted protein [Populus trichocarpa]
          Length = 487

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
 Frame = -1

Query: 1208 RFYKIFIMMSVVLILALATKRLVIGITLSAFLLFFIEFCCNYLISFLKSCINGCKGFMVS 1029
            R   + + M +V++L L+TK+LV+GIT+SAF+L F+E+   +++ FLK C+N      V 
Sbjct: 149  RLLFVVLKMFLVVVLGLSTKKLVVGITMSAFVLIFLEYVGKHVLCFLKPCLN------VE 202

Query: 1028 VHLEKGKNLIGVEERVVNNYVGFR--EEFDDLIKEKRIKEIDSELGKHDRLCQLLD-CER 858
            + LE         ERV + ++  +   + DD  KE  I+EI+ E       C L++  E 
Sbjct: 203  IVLEL------FVERVSSAFLMLKGVRKCDDSRKELIIQEIEQEEDVGIDSCDLIETLEM 256

Query: 857  KREIED 840
            K  +E+
Sbjct: 257  KSSLEE 262


Top