BLASTX nr result

ID: Coptis21_contig00016460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016460
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
emb|CBI29169.3| unnamed protein product [Vitis vinifera]              118   6e-25
emb|CBI29167.3| unnamed protein product [Vitis vinifera]              118   6e-25
emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]   118   6e-25

>ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 571

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 2   FLRPVFIVWKKMEEHGCSPDASAYNAIIDALIQKNMVDMARKYDEEMLAKGLSAKPRKEL 181
           FLRPVFIVWKKMEE GCSPDA AYNA+IDAL+QK MVD+ARKY+EEMLAKGLSAKPR +L
Sbjct: 505 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDL 564

Query: 182 GTKP 193
           GTKP
Sbjct: 565 GTKP 568


>ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
           mitochondrial-like [Vitis vinifera]
          Length = 390

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 2   FLRPVFIVWKKMEEHGCSPDASAYNAIIDALIQKNMVDMARKYDEEMLAKGLSAKPRKEL 181
           FLRPVFIVWKKMEE GCSPDA AYNA+IDAL+QK MVD+ARKY+EEMLAKGLSAKPR +L
Sbjct: 324 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDL 383

Query: 182 GTKP 193
           GTKP
Sbjct: 384 GTKP 387


>emb|CBI29169.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 2   FLRPVFIVWKKMEEHGCSPDASAYNAIIDALIQKNMVDMARKYDEEMLAKGLSAKPRKEL 181
           FLRPVFIVWKKMEE GCSPDA AYNA+IDAL+QK MVD+ARKY+EEMLAKGLSAKPR +L
Sbjct: 168 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDL 227

Query: 182 GTKP 193
           GTKP
Sbjct: 228 GTKP 231


>emb|CBI29167.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 2   FLRPVFIVWKKMEEHGCSPDASAYNAIIDALIQKNMVDMARKYDEEMLAKGLSAKPRKEL 181
           FLRPVFIVWKKMEE GCSPDA AYNA+IDAL+QK MVD+ARKY+EEMLAKGLSAKPR +L
Sbjct: 126 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDL 185

Query: 182 GTKP 193
           GTKP
Sbjct: 186 GTKP 189


>emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
          Length = 655

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/64 (85%), Positives = 60/64 (93%)
 Frame = +2

Query: 2   FLRPVFIVWKKMEEHGCSPDASAYNAIIDALIQKNMVDMARKYDEEMLAKGLSAKPRKEL 181
           FLRPVFIVWKKMEE GCSPDA AYNA+IDAL+QK MVD+ARKY+EEMLAKGLSAKPR +L
Sbjct: 589 FLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGLSAKPRVDL 648

Query: 182 GTKP 193
           GTKP
Sbjct: 649 GTKP 652


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