BLASTX nr result

ID: Coptis21_contig00016454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016454
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM86398.1| isopentenyltransferase [Malus x domestica]             190   9e-47
ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [...   184   6e-45
emb|CAN76279.1| hypothetical protein VITISV_013227 [Vitis vinifera]   184   6e-45
ref|XP_003606240.1| tRNA isopentenyltransferase [Medicago trunca...   182   2e-44
ref|XP_004169602.1| PREDICTED: tRNA dimethylallyltransferase 2-l...   180   1e-43

>gb|ADM86398.1| isopentenyltransferase [Malus x domestica]
          Length = 215

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/110 (81%), Positives = 105/110 (95%)
 Frame = +3

Query: 78  KKPKVIIIMGPTGSGKSKLAIDLSSHFPIEIINADSMQVYNGLDVLTNKVPLDEQKGVVH 257
           +KPKV++IMGPTGSGKSKLAIDL+SHFP+E+INADSMQVY+GLDVLTNKVPL EQKGV H
Sbjct: 21  EKPKVVVIMGPTGSGKSKLAIDLASHFPVEVINADSMQVYSGLDVLTNKVPLHEQKGVAH 80

Query: 258 HLLGNISPNVEFTSKDFRNSAMKIIDDIISRNRLPVIVGGTNYYIQALVS 407
           HLLG +SPNVEFT+K+FR+SA+ +I+DI+SRN LPVIVGGTNYYIQALVS
Sbjct: 81  HLLGTVSPNVEFTAKEFRDSAIPLINDILSRNCLPVIVGGTNYYIQALVS 130


>ref|XP_002263747.2| PREDICTED: tRNA dimethylallyltransferase 2 [Vitis vinifera]
           gi|297734839|emb|CBI17073.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  184 bits (467), Expect = 6e-45
 Identities = 94/120 (78%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
 Frame = +3

Query: 51  QQIEK*N-KMKKPKVIIIMGPTGSGKSKLAIDLSSHFPIEIINADSMQVYNGLDVLTNKV 227
           Q++E  N    K KV++IMG TGSGKSKLAIDL+SHFPIEIIN+DSMQVY GLDVLTNKV
Sbjct: 8   QKVENPNPNPNKTKVVVIMGATGSGKSKLAIDLASHFPIEIINSDSMQVYQGLDVLTNKV 67

Query: 228 PLDEQKGVVHHLLGNISPNVEFTSKDFRNSAMKIIDDIISRNRLPVIVGGTNYYIQALVS 407
           PL EQ GV HHLLG IS NVEFTSKDFR+SA+ +IDDIISRN LPV+VGGTNYYIQALVS
Sbjct: 68  PLHEQNGVPHHLLGTISSNVEFTSKDFRDSAIPLIDDIISRNNLPVLVGGTNYYIQALVS 127


>emb|CAN76279.1| hypothetical protein VITISV_013227 [Vitis vinifera]
          Length = 353

 Score =  184 bits (467), Expect = 6e-45
 Identities = 94/120 (78%), Positives = 104/120 (86%), Gaps = 1/120 (0%)
 Frame = +3

Query: 51  QQIEK*N-KMKKPKVIIIMGPTGSGKSKLAIDLSSHFPIEIINADSMQVYNGLDVLTNKV 227
           Q++E  N    K KV++IMG TGSGKSKLAIDL+SHFPIEIIN+DSMQVY GLDVLTNKV
Sbjct: 8   QKVENPNPNPNKTKVVVIMGATGSGKSKLAIDLASHFPIEIINSDSMQVYQGLDVLTNKV 67

Query: 228 PLDEQKGVVHHLLGNISPNVEFTSKDFRNSAMKIIDDIISRNRLPVIVGGTNYYIQALVS 407
           PL EQ GV HHLLG IS NVEFTSKDFR+SA+ +IDDIISRN LPV+VGGTNYYIQALVS
Sbjct: 68  PLHEQNGVPHHLLGTISSNVEFTSKDFRDSAIPLIDDIISRNNLPVLVGGTNYYIQALVS 127


>ref|XP_003606240.1| tRNA isopentenyltransferase [Medicago truncatula]
           gi|355507295|gb|AES88437.1| tRNA isopentenyltransferase
           [Medicago truncatula]
          Length = 481

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/110 (77%), Positives = 101/110 (91%)
 Frame = +3

Query: 78  KKPKVIIIMGPTGSGKSKLAIDLSSHFPIEIINADSMQVYNGLDVLTNKVPLDEQKGVVH 257
           K+PKV++I GPTGSGKSKLA+DL+SHFPIE+INADSMQVY GLD+LTNK+P  EQ GVVH
Sbjct: 15  KQPKVVVITGPTGSGKSKLAVDLASHFPIEVINADSMQVYRGLDILTNKLPFSEQNGVVH 74

Query: 258 HLLGNISPNVEFTSKDFRNSAMKIIDDIISRNRLPVIVGGTNYYIQALVS 407
           HLLG ++PN+EFT+K FR+SA+ IID+I+SRN LPVIVGGTNYYIQALVS
Sbjct: 75  HLLGCVNPNLEFTAKTFRDSAIPIIDEILSRNHLPVIVGGTNYYIQALVS 124


>ref|XP_004169602.1| PREDICTED: tRNA dimethylallyltransferase 2-like, partial [Cucumis
           sativus]
          Length = 189

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/110 (78%), Positives = 101/110 (91%)
 Frame = +3

Query: 78  KKPKVIIIMGPTGSGKSKLAIDLSSHFPIEIINADSMQVYNGLDVLTNKVPLDEQKGVVH 257
           +KPKV++IMGPTGSGKS+LAIDL+S+FP+EIINADSMQVY GLDVLTNKVP ++Q GV H
Sbjct: 20  EKPKVVVIMGPTGSGKSRLAIDLASYFPVEIINADSMQVYRGLDVLTNKVPPEDQNGVPH 79

Query: 258 HLLGNISPNVEFTSKDFRNSAMKIIDDIISRNRLPVIVGGTNYYIQALVS 407
           HLLG +SP+VEFT+KDFRNSA+ +ID IISR  LP+IVGGTNYYIQALVS
Sbjct: 80  HLLGTVSPDVEFTAKDFRNSAVHVIDGIISRGCLPMIVGGTNYYIQALVS 129


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