BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016448
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplasti...   246   5e-63
ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplasti...   233   3e-59
gb|AFK34471.1| unknown [Lotus japonicus]                              228   1e-57
ref|XP_003625999.1| NifU-like protein [Medicago truncatula] gi|3...   225   1e-56
ref|XP_002301529.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56

>ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplastic [Vitis vinifera]
           gi|297744011|emb|CBI36981.3| unnamed protein product
           [Vitis vinifera]
          Length = 213

 Score =  246 bits (628), Expect = 5e-63
 Identities = 138/215 (64%), Positives = 152/215 (70%), Gaps = 1/215 (0%)
 Frame = -3

Query: 872 LSLITTSGLLQNPLISNTQTS-KSYKNPIFITFKGHRTNDSKKQASLKVAFKTNATGGSP 696
           ++ +T +GL QN     ++TS K  KN   +  K  RT     Q +   A   +A  GSP
Sbjct: 1   MASLTATGLSQNSAFRLSKTSVKPQKNQPIVRLKPLRT---VLQRTAIKASNPSAPSGSP 57

Query: 695 GLYSAETFELNAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCPSSTTT 516
           GLYSA  FEL AKNVD VLEDVRPYL                 SLKLQGACGSCPSSTTT
Sbjct: 58  GLYSAHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTT 117

Query: 515 MKMGIERVLKEKFGDAVKDIRQVFDELENEVTVEAVNGHLDILRPAIKNYGGSVEVLSID 336
           M MGIERVLKEKFGDAVKDIRQV+DE   E TVEAVN HLDILRPAIKNYG SV+VLSI+
Sbjct: 118 MTMGIERVLKEKFGDAVKDIRQVYDEQTGETTVEAVNRHLDILRPAIKNYGSSVDVLSIE 177

Query: 335 GGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLT 231
           GGDC VKY GP+SIGSGIKAAIKEKFPDIVNVV +
Sbjct: 178 GGDCLVKYTGPESIGSGIKAAIKEKFPDIVNVVFS 212


>ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
           sativus] gi|449515245|ref|XP_004164660.1| PREDICTED:
           nifU-like protein 1, chloroplastic-like [Cucumis
           sativus]
          Length = 220

 Score =  233 bits (595), Expect = 3e-59
 Identities = 129/221 (58%), Positives = 155/221 (70%), Gaps = 6/221 (2%)
 Frame = -3

Query: 872 LSLITTSGLLQNPLISNTQTSKSYKNPIFITFKGHRTNDSKKQASLKVAFKTN------A 711
           ++ +TTSGLL+ PL ++   + S + P F  +  H+   S K+A    A + +      +
Sbjct: 1   MASLTTSGLLKTPLKNSQSPANSLQYPPF-AYGQHQLPVSLKRAFPGRAIRASPSNSGPS 59

Query: 710 TGGSPGLYSAETFELNAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCP 531
           T  SPGLYSA+ FEL   NVD VLEDVRPYL                 SLKL GACGSCP
Sbjct: 60  TTSSPGLYSAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGACGSCP 119

Query: 530 SSTTTMKMGIERVLKEKFGDAVKDIRQVFDELENEVTVEAVNGHLDILRPAIKNYGGSVE 351
           SSTTTMKMGIERVLKEKFGD+VK+I QV+DE   E T EAVN HLDILRPAI+NYGGSVE
Sbjct: 120 SSTTTMKMGIERVLKEKFGDSVKEICQVYDEEPKETTPEAVNSHLDILRPAIRNYGGSVE 179

Query: 350 VLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS 228
           V+SI+GGDC VKY GP+SIG+G+KAAIKE+FPDI NVV +S
Sbjct: 180 VISINGGDCLVKYEGPESIGTGVKAAIKERFPDITNVVFSS 220


>gb|AFK34471.1| unknown [Lotus japonicus]
          Length = 225

 Score =  228 bits (582), Expect = 1e-57
 Identities = 119/180 (66%), Positives = 137/180 (76%)
 Frame = -3

Query: 767 RTNDSKKQASLKVAFKTNATGGSPGLYSAETFELNAKNVDFVLEDVRPYLXXXXXXXXXX 588
           RT+ + + AS     +++++  SPGLYSA  F+L A NVD VLEDVRPYL          
Sbjct: 38  RTSSTIRFASSTNQNQSSSSSPSPGLYSAAKFDLTAPNVDLVLEDVRPYLISDGGNVEVV 97

Query: 587 XXXXXXXSLKLQGACGSCPSSTTTMKMGIERVLKEKFGDAVKDIRQVFDELENEVTVEAV 408
                  SLKLQGAC SCPSSTTTMK+GIERVLKEKFGDAVKDI QV+DE   E TVEAV
Sbjct: 98  SVENGVISLKLQGACESCPSSTTTMKLGIERVLKEKFGDAVKDIVQVYDEEPKETTVEAV 157

Query: 407 NGHLDILRPAIKNYGGSVEVLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS 228
           N HL+ILRPAIKN+GGSV+VLS++G DCHV YVGPDSIGSGIKAAIKEKFPDI+NV  T+
Sbjct: 158 NNHLEILRPAIKNFGGSVQVLSVEGSDCHVDYVGPDSIGSGIKAAIKEKFPDILNVTFTT 217


>ref|XP_003625999.1| NifU-like protein [Medicago truncatula] gi|355501014|gb|AES82217.1|
           NifU-like protein [Medicago truncatula]
           gi|388517667|gb|AFK46895.1| unknown [Medicago
           truncatula]
          Length = 216

 Score =  225 bits (573), Expect = 1e-56
 Identities = 125/219 (57%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
 Frame = -3

Query: 881 MASLSLITTSGLLQNPLISNTQTSKSYKNPIFITFKGHRTNDSKKQASLKVAFKTNATGG 702
           MA+L+ I +     N  I   Q + ++  P+F  FK  + N       ++ +   N    
Sbjct: 1   MATLTPICSIPTKLNLNIQQKQHNLNF--PLF-NFKIAKQNSRTSTTVIRSSSTANQNQS 57

Query: 701 SPGLYSAETFELNAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSLKLQGACGSCPSST 522
           SPGLYSA+ FEL A NVD VLEDVRPYL                 SLKLQGAC SCPSST
Sbjct: 58  SPGLYSAQKFELTASNVDLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSST 117

Query: 521 TTMKMGIERVLKEKFGDAVKDIRQVFDELE-NEVTVEAVNGHLDILRPAIKNYGGSVEVL 345
           TTMKMGIERVLKEKFGD+++DI QVFD+ +  E TVEAVN HL+ILRPAIKNYGGSV+VL
Sbjct: 118 TTMKMGIERVLKEKFGDSIEDIVQVFDDDQARETTVEAVNNHLEILRPAIKNYGGSVQVL 177

Query: 344 SIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS 228
           S++GGDC V+YVGP+SIGSG+KAAIKEKFPDI+NV  ++
Sbjct: 178 SVEGGDCVVEYVGPESIGSGVKAAIKEKFPDILNVTFST 216


>ref|XP_002301529.1| predicted protein [Populus trichocarpa] gi|222843255|gb|EEE80802.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  224 bits (571), Expect = 2e-56
 Identities = 117/171 (68%), Positives = 129/171 (75%), Gaps = 2/171 (1%)
 Frame = -3

Query: 734 KVAFKTNATGGS--PGLYSAETFELNAKNVDFVLEDVRPYLXXXXXXXXXXXXXXXXXSL 561
           K A K  A  GS  PGLYSA+ FELN +NVD VLE+VRPYL                 SL
Sbjct: 46  KTAIKATAPTGSSSPGLYSAQQFELNPQNVDLVLEEVRPYLIADGGNVDVVSVEDGVISL 105

Query: 560 KLQGACGSCPSSTTTMKMGIERVLKEKFGDAVKDIRQVFDELENEVTVEAVNGHLDILRP 381
           KLQGACG CPSSTTTMKMGIERVLKEKFGDA+KDIRQV DE   E TVE VNGHLDILRP
Sbjct: 106 KLQGACGDCPSSTTTMKMGIERVLKEKFGDAIKDIRQVSDEESKETTVERVNGHLDILRP 165

Query: 380 AIKNYGGSVEVLSIDGGDCHVKYVGPDSIGSGIKAAIKEKFPDIVNVVLTS 228
           AI N+GGSVEVLS++ G+C V+Y GP+SI SGIKAAIKEKFPDIV+VV  +
Sbjct: 166 AITNFGGSVEVLSVENGECRVQYTGPESIASGIKAAIKEKFPDIVDVVFVA 216