BLASTX nr result

ID: Coptis21_contig00016445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016445
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]   120   1e-25
emb|CBI21631.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   119   2e-25
ref|NP_189947.2| Spc97 / Spc98 family of spindle pole body (SBP)...   112   3e-23
emb|CAC05635.1| putative protein [Arabidopsis thaliana]               112   3e-23

>emb|CAN81051.1| hypothetical protein VITISV_024737 [Vitis vinifera]
          Length = 1070

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/94 (62%), Positives = 75/94 (79%)
 Frame = -3

Query: 284 SFYDPSTISEANLVRLAINALQGVEASLYAIEKLSESFCTDPADRTCHRIPSLWYRSSST 105
           S Y+ ST+SE +LVRLA+NALQGV ++L +I+KLS +FC+ PADRT H+IPSLW  S ST
Sbjct: 192 SLYNTSTLSETSLVRLAMNALQGVNSALISIDKLSAAFCSHPADRTFHQIPSLWNXSLST 251

Query: 104 NALGKVLKSIGRSGFVAFLIRKFVDYFRCQTLSV 3
            ALG +L+SIG SG V FL+RKFVDYF C  L++
Sbjct: 252 YALGNILRSIGCSGSVVFLLRKFVDYFLCTDLNL 285


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/94 (62%), Positives = 75/94 (79%)
 Frame = -3

Query: 284 SFYDPSTISEANLVRLAINALQGVEASLYAIEKLSESFCTDPADRTCHRIPSLWYRSSST 105
           S Y+ ST+SE +LVRLA+NALQGV ++L +I+KLS +FC+ PADRT H+IPSLW  S ST
Sbjct: 42  SLYNTSTLSETSLVRLAMNALQGVNSALISIDKLSAAFCSHPADRTFHQIPSLWNWSLST 101

Query: 104 NALGKVLKSIGRSGFVAFLIRKFVDYFRCQTLSV 3
            ALG +L+SIG SG V FL+RKFVDYF C  L++
Sbjct: 102 YALGNILRSIGCSGSVVFLLRKFVDYFLCTDLNL 135


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/94 (62%), Positives = 75/94 (79%)
 Frame = -3

Query: 284 SFYDPSTISEANLVRLAINALQGVEASLYAIEKLSESFCTDPADRTCHRIPSLWYRSSST 105
           S Y+ ST+SE +LVRLA+NALQGV ++L +I+KLS +FC+ PADRT H+IPSLW  S ST
Sbjct: 42  SLYNTSTLSETSLVRLAMNALQGVNSALISIDKLSAAFCSHPADRTFHQIPSLWNWSLST 101

Query: 104 NALGKVLKSIGRSGFVAFLIRKFVDYFRCQTLSV 3
            ALG +L+SIG SG V FL+RKFVDYF C  L++
Sbjct: 102 YALGNILRSIGCSGSVVFLLRKFVDYFLCTDLNL 135


>ref|NP_189947.2| Spc97 / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana] gi|332644292|gb|AEE77813.1| Spc97
           / Spc98 family of spindle pole body (SBP) component
           [Arabidopsis thaliana]
          Length = 1207

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/89 (60%), Positives = 73/89 (82%)
 Frame = -3

Query: 269 STISEANLVRLAINALQGVEASLYAIEKLSESFCTDPADRTCHRIPSLWYRSSSTNALGK 90
           S +SE++LVRLA+NALQGVE+SL +IE+LS +FC++PADRT H+IPSLW+R SST+ALG+
Sbjct: 48  SFVSESSLVRLALNALQGVESSLISIEQLSSAFCSEPADRTFHKIPSLWHRLSSTDALGQ 107

Query: 89  VLKSIGRSGFVAFLIRKFVDYFRCQTLSV 3
           +L+ IG  G + FL+ KFVD+F    L V
Sbjct: 108 ILRDIGCFGSLVFLLHKFVDHFTRLNLDV 136


>emb|CAC05635.1| putative protein [Arabidopsis thaliana]
          Length = 1120

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/89 (60%), Positives = 73/89 (82%)
 Frame = -3

Query: 269 STISEANLVRLAINALQGVEASLYAIEKLSESFCTDPADRTCHRIPSLWYRSSSTNALGK 90
           S +SE++LVRLA+NALQGVE+SL +IE+LS +FC++PADRT H+IPSLW+R SST+ALG+
Sbjct: 48  SFVSESSLVRLALNALQGVESSLISIEQLSSAFCSEPADRTFHKIPSLWHRLSSTDALGQ 107

Query: 89  VLKSIGRSGFVAFLIRKFVDYFRCQTLSV 3
           +L+ IG  G + FL+ KFVD+F    L V
Sbjct: 108 ILRDIGCFGSLVFLLHKFVDHFTRLNLDV 136


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