BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016432
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37668.1| gag protein [Populus trichocarpa]                      355   4e-96
gb|ABG37657.1| integrase [Populus trichocarpa]                        355   4e-96
ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819...   351   7e-95
gb|ABG37671.1| integrase [Populus trichocarpa]                        351   9e-95
gb|ABG37670.1| integrase [Populus trichocarpa]                        348   6e-94

>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score =  355 bits (912), Expect = 4e-96
 Identities = 163/233 (69%), Positives = 192/233 (82%)
 Frame = -2

Query: 699  KACPRCQFLGKTTKRFEGPQQPILISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSKWI 520
            + C  CQ LG  +K    P  PIL+ EIF+ WGIDFMGPFP SFG+ YIL+AVDYVSKWI
Sbjct: 929  ETCENCQKLGSISKLHMMPLNPILVIEIFECWGIDFMGPFPPSFGFLYILVAVDYVSKWI 988

Query: 519  EAIPSRTADHRVVIDFLKKNILPRFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLALP 340
            EAIPSRT DH+ VI FLK+NIL RFG PRA+ISD G+HFCN+ F  LM KYG+ HK+A P
Sbjct: 989  EAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYGITHKVATP 1048

Query: 339  YHPQTNGQAEVSNREIKSILEKTVNPSRKDWSLRLEDALWAYRTAFKTPIGMSPYRMVYG 160
            YHPQT+GQ E++NREIK ILEKTVNP+RKDWSLRL DALWAYRTA+KT +GMSPYR+VYG
Sbjct: 1049 YHPQTSGQVELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKTSLGMSPYRLVYG 1108

Query: 159  KACHLPVELEHRAYWAVKEMNFSLDQAGERRKLQINELEELRNDAYDKSKSYK 1
            K CHLPVE+EH+AYWA+K  N ++D A + RKLQINELEE+RNDAYD S+ +K
Sbjct: 1109 KPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDNSRIHK 1161



 Score =  128 bits (322), Expect = 1e-27
 Identities = 65/117 (55%), Positives = 80/117 (68%)
 Frame = -2

Query: 630  LISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSKWIEAIPSRTADHRVVIDFLKKNILP 451
            L++E    WG   +   PS     +    VDYVSKWIEAIPSRT DH+ VI FLK+NIL 
Sbjct: 704  LLAENAQNWGTTGIYEAPSKT-QPHTSSGVDYVSKWIEAIPSRTNDHKTVIKFLKENILS 762

Query: 450  RFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLALPYHPQTNGQAEVSNREIKSIL 280
            RFG PRA+ISD G+HFCN+ F  LM KYG+ HK+A PYHPQT+GQ +   R ++ IL
Sbjct: 763  RFGIPRAMISDGGTHFCNKPFESLMKKYGITHKVATPYHPQTSGQKDSKARLVRWIL 819


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score =  355 bits (912), Expect = 4e-96
 Identities = 163/233 (69%), Positives = 192/233 (82%)
 Frame = -2

Query: 699  KACPRCQFLGKTTKRFEGPQQPILISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSKWI 520
            + C  CQ LG  +K    P  PIL+ EIF+ WGIDFMGPFP SFG+ YIL+AVDYVSKWI
Sbjct: 781  ETCENCQKLGSISKLHMMPLNPILVIEIFECWGIDFMGPFPPSFGFLYILVAVDYVSKWI 840

Query: 519  EAIPSRTADHRVVIDFLKKNILPRFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLALP 340
            EAIPSRT DH+ VI FLK+NIL RFG PRA+ISD G+HFCN+ F  LM KYG+ HK+A P
Sbjct: 841  EAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYGITHKVATP 900

Query: 339  YHPQTNGQAEVSNREIKSILEKTVNPSRKDWSLRLEDALWAYRTAFKTPIGMSPYRMVYG 160
            YHPQT+GQ E++NREIK ILEKTVNP+RKDWSLRL DALWAYRTA+KT +GMSPYR+VYG
Sbjct: 901  YHPQTSGQVELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKTSLGMSPYRLVYG 960

Query: 159  KACHLPVELEHRAYWAVKEMNFSLDQAGERRKLQINELEELRNDAYDKSKSYK 1
            K CHLPVE+EH+AYWA+K  N ++D A + RKLQINELEE+RNDAYD S+ +K
Sbjct: 961  KPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDNSRIHK 1013



 Score =  128 bits (322), Expect = 1e-27
 Identities = 65/117 (55%), Positives = 80/117 (68%)
 Frame = -2

Query: 630 LISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSKWIEAIPSRTADHRVVIDFLKKNILP 451
           L++E    WG   +   PS     +    VDYVSKWIEAIPSRT DH+ VI FLK+NIL 
Sbjct: 556 LLAENAQNWGTTGIYEAPSKT-QPHTSSGVDYVSKWIEAIPSRTNDHKTVIKFLKENILS 614

Query: 450 RFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLALPYHPQTNGQAEVSNREIKSIL 280
           RFG PRA+ISD G+HFCN+ F  LM KYG+ HK+A PYHPQT+GQ +   R ++ IL
Sbjct: 615 RFGIPRAMISDGGTHFCNKPFESLMKKYGITHKVATPYHPQTSGQKDSKARLVRWIL 671


>ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819936 [Glycine max]
          Length = 1267

 Score =  351 bits (901), Expect = 7e-95
 Identities = 159/235 (67%), Positives = 195/235 (82%), Gaps = 1/235 (0%)
 Frame = -2

Query: 702  CKACPRCQFLGKT-TKRFEGPQQPILISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSK 526
            C  C +CQ  G T T R + PQQP+L  E+FDVWGIDFMGPFP SFGY YILL VDYVSK
Sbjct: 677  CSTCEQCQRAGNTLTWRQQMPQQPMLFFEVFDVWGIDFMGPFPVSFGYVYILLVVDYVSK 736

Query: 525  WIEAIPSRTADHRVVIDFLKKNILPRFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLA 346
            W+EA P+RT D +VV DF++ N+  RFG P+AI+SD G+HFCNR    L+ KYGV+H+++
Sbjct: 737  WVEAKPTRTNDAKVVADFVRSNLFCRFGVPKAIVSDQGTHFCNRTMHALLKKYGVVHRVS 796

Query: 345  LPYHPQTNGQAEVSNREIKSILEKTVNPSRKDWSLRLEDALWAYRTAFKTPIGMSPYRMV 166
            +PYHPQTNGQAE+SNREIK ILEK V PSRKDWS RL+DALWA+RTA+K PIG+SPYR+V
Sbjct: 797  IPYHPQTNGQAEISNREIKRILEKIVQPSRKDWSTRLDDALWAHRTAYKAPIGISPYRVV 856

Query: 165  YGKACHLPVELEHRAYWAVKEMNFSLDQAGERRKLQINELEELRNDAYDKSKSYK 1
            +GKACHLPVE+EH+AYWAVK  NFS+DQAGE RKLQ++EL+E+R +AY+ +K YK
Sbjct: 857  FGKACHLPVEIEHKAYWAVKTCNFSMDQAGEERKLQLSELDEIRLEAYENAKFYK 911


>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score =  351 bits (900), Expect = 9e-95
 Identities = 163/235 (69%), Positives = 189/235 (80%)
 Frame = -2

Query: 705  YCKACPRCQFLGKTTKRFEGPQQPILISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSK 526
            +CK C   Q LG  +K    P  PIL+ EIFD WGIDFMGPFP SFG+ YIL+AVDYVSK
Sbjct: 866  FCKTCENYQKLGSISKHHMMPLNPILVIEIFDCWGIDFMGPFPPSFGFLYILVAVDYVSK 925

Query: 525  WIEAIPSRTADHRVVIDFLKKNILPRFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLA 346
            WIEAIPSR  DH+ VI FLK+NIL RFG PRA+ISD G+HFCN  F  LM KYG+ HK+A
Sbjct: 926  WIEAIPSRNNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNTSFESLMKKYGITHKVA 985

Query: 345  LPYHPQTNGQAEVSNREIKSILEKTVNPSRKDWSLRLEDALWAYRTAFKTPIGMSPYRMV 166
             PYHPQT+GQ E++NREIK ILEKTVNP+RKDWSLRL DALWAYRTA+KT +GMSPY++V
Sbjct: 986  TPYHPQTSGQIELANREIKQILEKTVNPNRKDWSLRLNDALWAYRTAYKTSLGMSPYKLV 1045

Query: 165  YGKACHLPVELEHRAYWAVKEMNFSLDQAGERRKLQINELEELRNDAYDKSKSYK 1
            YGK CHLPVELEH+AYWA+K  N +LD A +  KLQINE EE+RNDAY+ SK +K
Sbjct: 1046 YGKPCHLPVELEHKAYWAIKAFNSNLDNASQLCKLQINEPEEIRNDAYENSKIHK 1100


>gb|ABG37670.1| integrase [Populus trichocarpa]
          Length = 649

 Score =  348 bits (893), Expect = 6e-94
 Identities = 160/233 (68%), Positives = 190/233 (81%)
 Frame = -2

Query: 699 KACPRCQFLGKTTKRFEGPQQPILISEIFDVWGIDFMGPFPSSFGYTYILLAVDYVSKWI 520
           + C   Q LG  +KR   P  PIL+ EIF+ WGIDFMGPFP SFG+ YIL+AVDYVSKWI
Sbjct: 180 ETCENYQKLGSISKRHMMPLNPILVIEIFECWGIDFMGPFPPSFGFLYILVAVDYVSKWI 239

Query: 519 EAIPSRTADHRVVIDFLKKNILPRFGAPRAIISDNGSHFCNRIFGHLMAKYGVIHKLALP 340
           EAIPSRT DH+ VI FLK+NIL RFG PRA+ISD G+HFCN+ F  LM KYG+ HK+A P
Sbjct: 240 EAIPSRTNDHKTVIKFLKENILSRFGIPRAMISDGGTHFCNKPFESLMKKYGITHKVATP 299

Query: 339 YHPQTNGQAEVSNREIKSILEKTVNPSRKDWSLRLEDALWAYRTAFKTPIGMSPYRMVYG 160
           YHPQT+GQ E++N+EIK ILEKTVNP+ KDWSLRL DALWAYRT +KT +GMSPYR+VYG
Sbjct: 300 YHPQTSGQVELANKEIKQILEKTVNPNWKDWSLRLNDALWAYRTTYKTSLGMSPYRLVYG 359

Query: 159 KACHLPVELEHRAYWAVKEMNFSLDQAGERRKLQINELEELRNDAYDKSKSYK 1
           K CHLPVE+EH+AYWA+K  N ++D A + RKLQINELEE+RNDAYD S+ +K
Sbjct: 360 KPCHLPVEIEHKAYWAIKAFNSNIDDASQLRKLQINELEEIRNDAYDNSRIHK 412