BLASTX nr result

ID: Coptis21_contig00016414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016414
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30658.3| unnamed protein product [Vitis vinifera]               94   3e-17
ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus c...    86   9e-15
emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]    60   4e-07
ref|NP_001119007.2| uncharacterized protein [Arabidopsis thalian...    60   7e-07
ref|NP_193584.3| uncharacterized protein [Arabidopsis thaliana] ...    60   7e-07

>emb|CBI30658.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
 Frame = +2

Query: 2   VDTSKSHDPAVAKGSSVILGNGNNDNDREISSGFQVHSTSISVQTTKLSTPKSLNXXXXX 181
           V TS+     VAKG +V+LG+  +  D    S  QV  +S   Q  K ST K +N     
Sbjct: 147 VSTSRPCVQEVAKGETVLLGSARSVKDLNTFS-LQVDPSSSIKQIAKSSTHKCVNPKPVV 205

Query: 182 XXXXXXXXXXXXD-EGNKLSLLHAAKKTLESSSLKLPKLVPPID-QSHSKVQTEIKSMRC 355
                         EGNKLS +    +T + SSLK+ +     +  S+S    EIKS+R 
Sbjct: 206 LSMGPIKNLKTISVEGNKLSGVKDLSRTPKPSSLKISRATGASNILSNSTFGKEIKSLRK 265

Query: 356 SGRNSEIPCATANMDRTVTVEIQRI---SSPSMKRKMVEESKEDPVTSFPSKRITSSPTE 526
           S +N E+   TA+        +++    SS S+KRK +EE+ E                 
Sbjct: 266 SEQNMELQGKTASKMVPSVDTLKKTPPTSSSSLKRKTLEEASEV---------------- 309

Query: 527 FRDTRGSLERVATKRVCTSENLLDGYNSS---PTFDVHRDECLKELEVPLLMENDGNVEK 697
                     V  ++VC  E L+D    +      D  R+  + ELE+PL MEND NVEK
Sbjct: 310 ----------VFKEQVCNQEKLVDMNTKNVLTSVLDTPREVNMSELEIPLAMENDLNVEK 359

Query: 698 AEAYTKELEDVSNL 739
           AEAYTK+LED+ N+
Sbjct: 360 AEAYTKDLEDICNM 373


>ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus communis]
            gi|223538227|gb|EEF39836.1| hypothetical protein
            RCOM_1013810 [Ricinus communis]
          Length = 807

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 64/175 (36%), Positives = 98/175 (56%), Gaps = 9/175 (5%)
 Frame = +2

Query: 242  LHAAKKTLESSSLKLPK-LVPPIDQSHSKVQTEIKSMRCSGRNSEIPCATAN--MDRTVT 412
            L A K   + SSLK+ + L    DQS+S ++ EI S+R S +N E+   TA+  +   V+
Sbjct: 586  LKAGKGMPDLSSLKISRTLGVNKDQSNSVLKREISSLRNSEKNMEVQGFTASKIVHPIVS 645

Query: 413  VEIQRISSPSMKRKMVEESKEDPVTSFPSKRITSSPTEFRDTRGSLERVATK--RVCTSE 586
             E + +  PS+KRK  E S E+     P KR++ SP+E R+ + + E    +  R  T E
Sbjct: 646  AERETLPVPSLKRKTSEASNENLQQLNPRKRLSQSPSESRNLKETSESTVEEEVRAATPE 705

Query: 587  ----NLLDGYNSSPTFDVHRDECLKELEVPLLMENDGNVEKAEAYTKELEDVSNL 739
                N+L  +  S   ++ +   ++E  + L MENDGNV KAEAY KELED+ ++
Sbjct: 706  SDPINVLRNHPHSG-LELPQQLSMEEQNISLAMENDGNVAKAEAYAKELEDICSM 759


>emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]
          Length = 649

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = +2

Query: 551 ERVATKRVCTSENLLDGYNSS---PTFDVHRDECLKELEVPLLMENDGNVEKAEAYTKEL 721
           E V  ++VC  E L+D    +      D  R+  + ELE+PL MEND NVEKAEAYTK+L
Sbjct: 528 EVVFKEQVCNQEKLVDMNTKNVLTSVLDTPREVNMSELEIPLAMENDLNVEKAEAYTKDL 587

Query: 722 EDVSNL 739
           ED+ N+
Sbjct: 588 EDICNM 593


>ref|NP_001119007.2| uncharacterized protein [Arabidopsis thaliana]
            gi|332658653|gb|AEE84053.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 755

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
 Frame = +2

Query: 308  DQSHSKVQTEIKSMRCSGRNSEIPCATAN-------MDRTVTVEIQRISSPSMKRKMVEE 466
            DQ  S VQ E  S     RN+E P   ++        D+T T+        S+KRK ++E
Sbjct: 567  DQPSSAVQPEFSSSISKERNTEAPVKKSSEIHHLAPRDKTQTLHCPS----SLKRKALDE 622

Query: 467  SKEDPVTSFPSKRITSSPTEFRDTRGSLERVATKRVCTSENLLDGYNS------SPTFDV 628
              +  +     KR++ SP E R+      R    +  + E+ +D   +      SP    
Sbjct: 623  DADRSLKP-QLKRLSMSPRENRNVEELTHRAVQGKFSSQESRIDTKTTKEPVKESPQTKS 681

Query: 629  HRDEC-LKELEVPLLMENDGNVEKAEAYTKELEDVSNL 739
            H     +  LE+P+  EN  N+EKAEAYTKELE++ N+
Sbjct: 682  HYQNINMANLEIPIT-ENADNIEKAEAYTKELENICNI 718


>ref|NP_193584.3| uncharacterized protein [Arabidopsis thaliana]
            gi|357529131|sp|P16128.3|Y4849_ARATH RecName:
            Full=Uncharacterized protein At4g18490
            gi|332658652|gb|AEE84052.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 756

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
 Frame = +2

Query: 308  DQSHSKVQTEIKSMRCSGRNSEIPCATAN-------MDRTVTVEIQRISSPSMKRKMVEE 466
            DQ  S VQ E  S     RN+E P   ++        D+T T+        S+KRK ++E
Sbjct: 568  DQPSSAVQPEFSSSISKERNTEAPVKKSSEIHHLAPRDKTQTLHCPS----SLKRKALDE 623

Query: 467  SKEDPVTSFPSKRITSSPTEFRDTRGSLERVATKRVCTSENLLDGYNS------SPTFDV 628
              +  +     KR++ SP E R+      R    +  + E+ +D   +      SP    
Sbjct: 624  DADRSLKP-QLKRLSMSPRENRNVEELTHRAVQGKFSSQESRIDTKTTKEPVKESPQTKS 682

Query: 629  HRDEC-LKELEVPLLMENDGNVEKAEAYTKELEDVSNL 739
            H     +  LE+P+  EN  N+EKAEAYTKELE++ N+
Sbjct: 683  HYQNINMANLEIPIT-ENADNIEKAEAYTKELENICNI 719


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