BLASTX nr result

ID: Coptis21_contig00016404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016404
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163153.1| PREDICTED: LOW QUALITY PROTEIN: protein PROL...   208   3e-52
ref|XP_002515287.1| DNA replication licensing factor MCM7, putat...   208   3e-52
ref|XP_002276329.1| PREDICTED: protein PROLIFERA [Vitis vinifera...   207   5e-52
emb|CAN61585.1| hypothetical protein VITISV_007265 [Vitis vinifera]   207   5e-52
ref|XP_004136153.1| PREDICTED: protein PROLIFERA-like [Cucumis s...   207   9e-52

>ref|XP_004163153.1| PREDICTED: LOW QUALITY PROTEIN: protein PROLIFERA-like [Cucumis
           sativus]
          Length = 743

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/125 (85%), Positives = 110/125 (88%)
 Frame = -3

Query: 429 HSYTTVRTXXXXXXXXXXXXXXRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 250
           HSYTTVRT              RFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI
Sbjct: 619 HSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 678

Query: 249 SDIYSILRDEAARTNKLDVSYADALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 70
           SDIYSILRDEA+RTNK+DVSYA ALNWISRKGYSEAQLKECLEEYAALNVWQIHP+TFDI
Sbjct: 679 SDIYSILRDEASRTNKMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDI 738

Query: 69  RFIDA 55
           RFIDA
Sbjct: 739 RFIDA 743


>ref|XP_002515287.1| DNA replication licensing factor MCM7, putative [Ricinus communis]
           gi|223545767|gb|EEF47271.1| DNA replication licensing
           factor MCM7, putative [Ricinus communis]
          Length = 718

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/125 (85%), Positives = 110/125 (88%)
 Frame = -3

Query: 429 HSYTTVRTXXXXXXXXXXXXXXRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 250
           HSYTTVRT              RFSETVAQSDVDEALRLMQMSKFSLYSDDRQ+SGLDAI
Sbjct: 594 HSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQRSGLDAI 653

Query: 249 SDIYSILRDEAARTNKLDVSYADALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 70
           SDIYSILRDEAARTNK+DVSYA ALNWISRKGYSEAQLKECLEEYAALNVWQIHP+TFDI
Sbjct: 654 SDIYSILRDEAARTNKMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDI 713

Query: 69  RFIDA 55
           RFIDA
Sbjct: 714 RFIDA 718


>ref|XP_002276329.1| PREDICTED: protein PROLIFERA [Vitis vinifera]
           gi|297743977|emb|CBI36947.3| unnamed protein product
           [Vitis vinifera]
          Length = 718

 Score =  207 bits (528), Expect = 5e-52
 Identities = 106/125 (84%), Positives = 110/125 (88%)
 Frame = -3

Query: 429 HSYTTVRTXXXXXXXXXXXXXXRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 250
           HSYTTVRT              RFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI
Sbjct: 594 HSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 653

Query: 249 SDIYSILRDEAARTNKLDVSYADALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 70
           SDIYSILRDEAAR+N++D+SYA ALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI
Sbjct: 654 SDIYSILRDEAARSNRMDLSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 713

Query: 69  RFIDA 55
           RFIDA
Sbjct: 714 RFIDA 718


>emb|CAN61585.1| hypothetical protein VITISV_007265 [Vitis vinifera]
          Length = 703

 Score =  207 bits (528), Expect = 5e-52
 Identities = 106/125 (84%), Positives = 110/125 (88%)
 Frame = -3

Query: 429 HSYTTVRTXXXXXXXXXXXXXXRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 250
           HSYTTVRT              RFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI
Sbjct: 579 HSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 638

Query: 249 SDIYSILRDEAARTNKLDVSYADALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 70
           SDIYSILRDEAAR+N++D+SYA ALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI
Sbjct: 639 SDIYSILRDEAARSNRMDLSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 698

Query: 69  RFIDA 55
           RFIDA
Sbjct: 699 RFIDA 703


>ref|XP_004136153.1| PREDICTED: protein PROLIFERA-like [Cucumis sativus]
          Length = 743

 Score =  207 bits (526), Expect = 9e-52
 Identities = 106/125 (84%), Positives = 109/125 (87%)
 Frame = -3

Query: 429 HSYTTVRTXXXXXXXXXXXXXXRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 250
           HSYTTVRT              RFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI
Sbjct: 619 HSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAI 678

Query: 249 SDIYSILRDEAARTNKLDVSYADALNWISRKGYSEAQLKECLEEYAALNVWQIHPNTFDI 70
           SDIYSILRDEA+RTNK+DV YA ALNWISRKGYSEAQLKECLEEYAALNVWQIHP+TFDI
Sbjct: 679 SDIYSILRDEASRTNKMDVGYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDI 738

Query: 69  RFIDA 55
           RFIDA
Sbjct: 739 RFIDA 743


Top