BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016388
         (1390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH...   441   e-121
emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]   437   e-120
ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycin...   414   e-113
ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabi...   410   e-112

>ref|XP_002282453.1| PREDICTED: putative RNA-binding protein ylmH [Vitis vinifera]
           gi|302142996|emb|CBI20291.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  441 bits (1134), Expect = e-121
 Identities = 218/275 (79%), Positives = 251/275 (91%)
 Frame = +3

Query: 135 SPVAGICHEVHAYRRDADDVLLKGVADKNTVEAVRHILEMARRASSRREVLHTDFLTPPI 314
           S  +G+CH   A + DA+  LLKGVAD++T+EAV+HILEMA+RAS+RREVLHTDFLTPP+
Sbjct: 48  SSASGMCHLAQAMKGDANS-LLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPV 106

Query: 315 LKESMHVLEKLADVKAVAQGGYPQAERCRLSVGHSEAMTTVPDVVTSLSITGNFGFQPCS 494
           LKESM VLEKLAD+KAVAQGGYPQAERCRLSVGHSE +TT PD+V +L ITGNFGFQ CS
Sbjct: 107 LKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCS 166

Query: 495 HGDFLGAILGVGIAREKLGDILLQGEKGAHILVVPELVDFLVTSLDKVGNVPVSCTKIPL 674
           HGDFLGAILG GIAREKLGDI+LQGEKGA +L+VPELVDFLV+SL+KVGNV VSCTK+PL
Sbjct: 167 HGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPL 226

Query: 675 LALEYEPPRTKSFKTIEASLRVDAIASAGFKVSRSKLVDLISNGDVHLNWSLVTKNGATL 854
           LALEYE PRT +FKTIE SLRVDA+ASAGFK+SRSKLVDLISNGDV +NW+ VTKNG TL
Sbjct: 227 LALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTL 286

Query: 855 KTGDIISVSGKGRLKIGEINTTRKGKFAVELIQYL 959
           KTGD++SVSGKGRLKIGEIN+T+KGK+AVELI++L
Sbjct: 287 KTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 321


>emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis vinifera]
          Length = 269

 Score =  437 bits (1124), Expect = e-120
 Identities = 216/270 (80%), Positives = 248/270 (91%)
 Frame = +3

Query: 150 ICHEVHAYRRDADDVLLKGVADKNTVEAVRHILEMARRASSRREVLHTDFLTPPILKESM 329
           +CH   A + DA+  LLKGVAD++T+EAV+HILEMA+RAS+RREVLHTDFLTPP+LKESM
Sbjct: 1   MCHLAQAMKGDANS-LLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESM 59

Query: 330 HVLEKLADVKAVAQGGYPQAERCRLSVGHSEAMTTVPDVVTSLSITGNFGFQPCSHGDFL 509
            VLEKLAD+KAVAQGGYPQAERCRLSVGHSE +TT PD+V +L ITGNFGFQ CSHGDFL
Sbjct: 60  IVLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFL 119

Query: 510 GAILGVGIAREKLGDILLQGEKGAHILVVPELVDFLVTSLDKVGNVPVSCTKIPLLALEY 689
           GAILG GIAREKLGDI+LQGEKGA +L+VPELVDFLV+SL+KVGNV VSCTK+PLLALEY
Sbjct: 120 GAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEY 179

Query: 690 EPPRTKSFKTIEASLRVDAIASAGFKVSRSKLVDLISNGDVHLNWSLVTKNGATLKTGDI 869
           E PRT +FKTIE SLRVDA+ASAGFK+SRSKLVDLISNGDV +NW+ VTKNG TLKTGD+
Sbjct: 180 EEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDV 239

Query: 870 ISVSGKGRLKIGEINTTRKGKFAVELIQYL 959
           +SVSGKGRLKIGEIN+T+KGK+AVELI++L
Sbjct: 240 VSVSGKGRLKIGEINSTKKGKYAVELIRFL 269


>ref|NP_001241156.1| uncharacterized protein LOC100793767 [Glycine max]
           gi|255642537|gb|ACU21532.1| unknown [Glycine max]
          Length = 324

 Score =  414 bits (1065), Expect = e-113
 Identities = 207/299 (69%), Positives = 255/299 (85%)
 Frame = +3

Query: 63  LTKQTRISTLANFPFLHITNPINFSPVAGICHEVHAYRRDADDVLLKGVADKNTVEAVRH 242
           L    ++S   NF   H+ + ++ S  +G+   V A + + D +LLKGV +++  + V+H
Sbjct: 29  LRNNVKLSLQRNF-CSHLLS-VSTSLASGVSQTVQALKGEVD-LLLKGVGERSVTKEVKH 85

Query: 243 ILEMARRASSRREVLHTDFLTPPILKESMHVLEKLADVKAVAQGGYPQAERCRLSVGHSE 422
           ILEMARRAS +RE+LHTDFLTPP+LKESM VLEKLADVKA+AQGGYPQAERCR+SVGH E
Sbjct: 86  ILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAIAQGGYPQAERCRISVGHPE 145

Query: 423 AMTTVPDVVTSLSITGNFGFQPCSHGDFLGAILGVGIAREKLGDILLQGEKGAHILVVPE 602
            +T+ PD++++LSITGNF F+PCSHGDFLG+ILG GI REKLGDI+LQGE+GA I+VVPE
Sbjct: 146 ELTSDPDIISALSITGNFQFEPCSHGDFLGSILGTGIVREKLGDIILQGEQGAQIIVVPE 205

Query: 603 LVDFLVTSLDKVGNVPVSCTKIPLLALEYEPPRTKSFKTIEASLRVDAIASAGFKVSRSK 782
           LV+FL+++L KV NVPVSCTKIPL++L+YEPPRTKSFKTIEASLRVDA+ASAGFKVSRSK
Sbjct: 206 LVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKVSRSK 265

Query: 783 LVDLISNGDVHLNWSLVTKNGATLKTGDIISVSGKGRLKIGEINTTRKGKFAVELIQYL 959
           LVD+ISNGDV +NW  VT  G TLK+GDI+S+SGKGRLKIGEIN+T+KGKFAVELI+YL
Sbjct: 266 LVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGKGRLKIGEINSTKKGKFAVELIRYL 324


>ref|XP_002316899.1| predicted protein [Populus trichocarpa] gi|222859964|gb|EEE97511.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score =  410 bits (1055), Expect = e-112
 Identities = 204/270 (75%), Positives = 235/270 (87%)
 Frame = +3

Query: 150 ICHEVHAYRRDADDVLLKGVADKNTVEAVRHILEMARRASSRREVLHTDFLTPPILKESM 329
           +CH   A + +   V LKGV DK+ +E V+ IL+MARRAS RREVLHTDFLTPP LKES+
Sbjct: 1   MCHVAQATKGEV--VALKGVEDKSVIEEVKRILDMARRASLRREVLHTDFLTPPTLKESL 58

Query: 330 HVLEKLADVKAVAQGGYPQAERCRLSVGHSEAMTTVPDVVTSLSITGNFGFQPCSHGDFL 509
           HVLEKLADVKA+AQGGYPQAERCRLSVGH E +T+ PD+V +LSITGNFGFQ CSHGDFL
Sbjct: 59  HVLEKLADVKAIAQGGYPQAERCRLSVGHPETLTSDPDIVAALSITGNFGFQLCSHGDFL 118

Query: 510 GAILGVGIAREKLGDILLQGEKGAHILVVPELVDFLVTSLDKVGNVPVSCTKIPLLALEY 689
           GAILG GIAR KLGDI++ G K A +L+VP+LVD++V+SLDKVG+V VSCT IPL A+EY
Sbjct: 119 GAILGTGIARNKLGDIIVLGGKRAQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEY 178

Query: 690 EPPRTKSFKTIEASLRVDAIASAGFKVSRSKLVDLISNGDVHLNWSLVTKNGATLKTGDI 869
           EPPRTKSFKT+EASLRVDA+ASAGFK+SRSKLVDLISN DV +NW+ +TKN  TLKTGD+
Sbjct: 179 EPPRTKSFKTVEASLRVDALASAGFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDV 238

Query: 870 ISVSGKGRLKIGEINTTRKGKFAVELIQYL 959
           +SVSGKGRLKIGEINTTRKGKFAVELI YL
Sbjct: 239 VSVSGKGRLKIGEINTTRKGKFAVELIHYL 268


>ref|NP_564622.1| RNA-binding S4 domain-containing protein [Arabidopsis thaliana]
           gi|16648939|gb|AAL24321.1| Unknown protein [Arabidopsis
           thaliana] gi|24899783|gb|AAN65106.1| Unknown protein
           [Arabidopsis thaliana] gi|27311617|gb|AAO00774.1|
           Unknown protein [Arabidopsis thaliana]
           gi|30984534|gb|AAP42730.1| At1g53120 [Arabidopsis
           thaliana] gi|332194772|gb|AEE32893.1| RNA-binding S4
           domain-containing protein [Arabidopsis thaliana]
          Length = 320

 Score =  410 bits (1054), Expect = e-112
 Identities = 199/269 (73%), Positives = 237/269 (88%)
 Frame = +3

Query: 153 CHEVHAYRRDADDVLLKGVADKNTVEAVRHILEMARRASSRREVLHTDFLTPPILKESMH 332
           C+   A + D D  LLKGV D+   + V+ ILEMARRASS+REVLHTDFLTPPI+KES+ 
Sbjct: 53  CYSAEAIKGDVD-FLLKGVGDQAVAKEVKQILEMARRASSKREVLHTDFLTPPIVKESVS 111

Query: 333 VLEKLADVKAVAQGGYPQAERCRLSVGHSEAMTTVPDVVTSLSITGNFGFQPCSHGDFLG 512
           +LEK ADVK VAQGGYP+AERCR+S+GH + +T+ PD+V +LSITGNFGFQPCSHGDFLG
Sbjct: 112 LLEKFADVKIVAQGGYPEAERCRISIGHPDVLTSDPDIVAALSITGNFGFQPCSHGDFLG 171

Query: 513 AILGVGIAREKLGDILLQGEKGAHILVVPELVDFLVTSLDKVGNVPVSCTKIPLLALEYE 692
           AILG GI+REKLGDIL+Q EKGA +L+VPELVDF+VT+LDKVGNV V+C+KIPLLALEYE
Sbjct: 172 AILGTGISREKLGDILIQEEKGAQVLIVPELVDFVVTALDKVGNVGVTCSKIPLLALEYE 231

Query: 693 PPRTKSFKTIEASLRVDAIASAGFKVSRSKLVDLISNGDVHLNWSLVTKNGATLKTGDII 872
           PPRT SFKT+EASLR+DA+ASAGFK+SRSKLVDLIS+ DV +NW+ VTKNG  +KTGD++
Sbjct: 232 PPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLISSKDVRVNWATVTKNGTIVKTGDVV 291

Query: 873 SVSGKGRLKIGEINTTRKGKFAVELIQYL 959
           SVSGKGRLKIGEIN T+KGKFAVE+I+YL
Sbjct: 292 SVSGKGRLKIGEINETKKGKFAVEIIRYL 320