BLASTX nr result

ID: Coptis21_contig00016356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016356
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303254.1| predicted protein [Populus trichocarpa] gi|2...   262   8e-68
dbj|BAJ53229.1| JHL06P13.9 [Jatropha curcas]                          261   2e-67
ref|XP_002298104.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
ref|XP_002517614.1| Microsomal signal peptidase 18 kDa subunit, ...   260   4e-67
gb|ABK93826.1| unknown [Populus trichocarpa]                          260   4e-67

>ref|XP_002303254.1| predicted protein [Populus trichocarpa] gi|222840686|gb|EEE78233.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  262 bits (670), Expect = 8e-68
 Identities = 124/181 (68%), Positives = 155/181 (85%)
 Frame = +2

Query: 32  MEFLGKAVDSARSIKIRQLATQGINLGMLITSVLMIWKFWVCLSGSESPVVVVLTGSMEP 211
           M ++G  VDS +SI+IRQL TQ ++LGM++TS L+IWK  +C++GSESPVVVVL+GSMEP
Sbjct: 1   MGWIGDTVDSVKSIQIRQLLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60

Query: 212 AFKRGDILFLYMNTSPISAGEIIVFNVEGKKIPIVHRVVTVHERQDTREIDVLTKGDNNS 391
            FKRGDILFL+M+  PI AGEI+VFNV+G++IPIVHRV+ VHERQDT E+DVLTKGDNN 
Sbjct: 61  GFKRGDILFLHMSKDPIRAGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY 120

Query: 392 LDDRNGVYSRDQLWLQRHHIVGRVTGFLPYFGWATIILTEQPIFKYVILGALGLLVITSS 571
            DDR  +Y++ QLWLQRHHI+GR  GFLPY GW TII+TE+PI KY+++GALGLLVITS 
Sbjct: 121 GDDRL-LYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK 179

Query: 572 E 574
           +
Sbjct: 180 D 180


>dbj|BAJ53229.1| JHL06P13.9 [Jatropha curcas]
          Length = 180

 Score =  261 bits (667), Expect = 2e-67
 Identities = 124/181 (68%), Positives = 155/181 (85%)
 Frame = +2

Query: 32  MEFLGKAVDSARSIKIRQLATQGINLGMLITSVLMIWKFWVCLSGSESPVVVVLTGSMEP 211
           M ++G  VDS +SI+IRQL TQ ++LGM++TS L+IWK  +C++GSESPVVVVL+GSMEP
Sbjct: 1   MGWIGDNVDSIKSIQIRQLLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60

Query: 212 AFKRGDILFLYMNTSPISAGEIIVFNVEGKKIPIVHRVVTVHERQDTREIDVLTKGDNNS 391
            FKRGDILFL+M+  PI AGEI+VFNV+G++IPIVHRV+ VHERQDT E+DVLTKGDNN 
Sbjct: 61  GFKRGDILFLHMSKDPIRAGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY 120

Query: 392 LDDRNGVYSRDQLWLQRHHIVGRVTGFLPYFGWATIILTEQPIFKYVILGALGLLVITSS 571
            DDR  +Y++ QLWLQRHHI+GR  GFLPY GW TII+TE+PI KY+++GALGLLVITS 
Sbjct: 121 GDDRL-LYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK 179

Query: 572 E 574
           +
Sbjct: 180 D 180


>ref|XP_002298104.1| predicted protein [Populus trichocarpa] gi|222845362|gb|EEE82909.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  260 bits (665), Expect = 3e-67
 Identities = 123/181 (67%), Positives = 154/181 (85%)
 Frame = +2

Query: 32  MEFLGKAVDSARSIKIRQLATQGINLGMLITSVLMIWKFWVCLSGSESPVVVVLTGSMEP 211
           M ++G  VDS +SI+IRQL TQ ++LGM++TS L+IWK  +C++GSESPVVVVL+GSMEP
Sbjct: 1   MGWIGDTVDSIKSIQIRQLLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60

Query: 212 AFKRGDILFLYMNTSPISAGEIIVFNVEGKKIPIVHRVVTVHERQDTREIDVLTKGDNNS 391
            FKRGDILFL+M+  PI  GEI+VFNV+G++IPIVHRV+ VHERQDT E+DVLTKGDNN 
Sbjct: 61  GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY 120

Query: 392 LDDRNGVYSRDQLWLQRHHIVGRVTGFLPYFGWATIILTEQPIFKYVILGALGLLVITSS 571
            DDR  +Y++ QLWLQRHHI+GR  GFLPY GW TII+TE+PI KY+++GALGLLVITS 
Sbjct: 121 GDDRL-LYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK 179

Query: 572 E 574
           +
Sbjct: 180 D 180


>ref|XP_002517614.1| Microsomal signal peptidase 18 kDa subunit, putative [Ricinus
           communis] gi|223543246|gb|EEF44778.1| Microsomal signal
           peptidase 18 kDa subunit, putative [Ricinus communis]
          Length = 180

 Score =  260 bits (664), Expect = 4e-67
 Identities = 122/181 (67%), Positives = 155/181 (85%)
 Frame = +2

Query: 32  MEFLGKAVDSARSIKIRQLATQGINLGMLITSVLMIWKFWVCLSGSESPVVVVLTGSMEP 211
           M ++G+ VDS +SI+IRQL TQ ++LGM++TS L+IWK  +C++GSESPVVVVL+GSMEP
Sbjct: 1   MGWIGETVDSIKSIQIRQLLTQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP 60

Query: 212 AFKRGDILFLYMNTSPISAGEIIVFNVEGKKIPIVHRVVTVHERQDTREIDVLTKGDNNS 391
            FKRGDILFL+M+  PI  GEI+VFNV+G++IPIVHRV+ VHER+DT E+DVLTKGDNN 
Sbjct: 61  GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHEREDTGEVDVLTKGDNNY 120

Query: 392 LDDRNGVYSRDQLWLQRHHIVGRVTGFLPYFGWATIILTEQPIFKYVILGALGLLVITSS 571
            DDR  +Y++ QLWLQRHHI+GR  GFLPY GW TII+TE+PI KY+++GALGLLVITS 
Sbjct: 121 GDDRL-LYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK 179

Query: 572 E 574
           +
Sbjct: 180 D 180


>gb|ABK93826.1| unknown [Populus trichocarpa]
          Length = 180

 Score =  260 bits (664), Expect = 4e-67
 Identities = 122/181 (67%), Positives = 154/181 (85%)
 Frame = +2

Query: 32  MEFLGKAVDSARSIKIRQLATQGINLGMLITSVLMIWKFWVCLSGSESPVVVVLTGSMEP 211
           M ++G  VDS +SI+IRQL TQ ++LGM++TS L++WK  +C++GSESPVVVVL+GSMEP
Sbjct: 1   MGWIGDTVDSIKSIQIRQLLTQAVSLGMIVTSALVVWKALMCITGSESPVVVVLSGSMEP 60

Query: 212 AFKRGDILFLYMNTSPISAGEIIVFNVEGKKIPIVHRVVTVHERQDTREIDVLTKGDNNS 391
            FKRGDILFL+M+  PI  GEI+VFNV+G++IPIVHRV+ VHERQDT E+DVLTKGDNN 
Sbjct: 61  GFKRGDILFLHMSKDPIRTGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY 120

Query: 392 LDDRNGVYSRDQLWLQRHHIVGRVTGFLPYFGWATIILTEQPIFKYVILGALGLLVITSS 571
            DDR  +Y++ QLWLQRHHI+GR  GFLPY GW TII+TE+PI KY+++GALGLLVITS 
Sbjct: 121 GDDRL-LYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSK 179

Query: 572 E 574
           +
Sbjct: 180 D 180


Top