BLASTX nr result
ID: Coptis21_contig00016355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00016355
(635 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2... 82 1e-23
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-23
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm... 67 1e-18
gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo] 55 1e-10
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264... 64 3e-10
>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
predicted protein [Populus trichocarpa]
Length = 446
Score = 81.6 bits (200), Expect(3) = 1e-23
Identities = 44/78 (56%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +2
Query: 218 VKKDDRVLFGVQPKNLFKEGEQSSFSKRPIKSGRVVASRYSQIPA-QCSGNQTQNDCRKM 394
VKK+D V+ +QPKNLFK+GE+S +K+P+K GRVVASRY+QI Q +GN T ++ RK
Sbjct: 266 VKKEDGVIASIQPKNLFKDGERSVPNKKPLKPGRVVASRYNQIGTNQSNGNLTASEARKR 325
Query: 395 SLPGNDKCD--KKRSSVG 442
SLP N+K D K+R+S G
Sbjct: 326 SLPDNEKEDVNKRRASRG 343
Score = 38.1 bits (87), Expect(3) = 1e-23
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +3
Query: 501 TEALTYKI-LTHNNPHLGMNVADVLPKIRTIRNRYESPQDSGPAKK 635
+E + YK +P V D+LP I+T+R+ E+P+DSGPAK+
Sbjct: 363 SEVVVYKDDAEEESPQAVSVVTDMLPNIKTVRSVAETPRDSGPAKR 408
Score = 35.8 bits (81), Expect(3) = 1e-23
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 37 NLSPQLRLAQSKIQVSKQRFMTTGSNKTVKKDDRV 141
++SP+ R SKIQV KQ T GS ++VKK+D V
Sbjct: 238 SVSPRSRKNVSKIQVPKQAVTTVGSRRSVKKEDGV 272
>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
predicted protein [Populus trichocarpa]
Length = 443
Score = 81.6 bits (200), Expect(3) = 3e-23
Identities = 43/78 (55%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +2
Query: 218 VKKDDRVLFGVQPKNLFKEGEQSSFSKRPIKSGRVVASRYSQIPA-QCSGNQTQNDCRKM 394
VKK+D ++ +QPKNLFK+GE+S +K+P+K GRVVASRYSQI Q +GN + ++ RK
Sbjct: 266 VKKEDGIIASIQPKNLFKDGEKSVTNKKPLKPGRVVASRYSQIGTNQSNGNLSASEARKR 325
Query: 395 SLPGNDKCD--KKRSSVG 442
SLP N+K D K+R+S G
Sbjct: 326 SLPDNEKEDVNKRRASRG 343
Score = 38.9 bits (89), Expect(3) = 3e-23
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 537 NPHLGMNVADVLPKIRTIRNRYESPQDSGPAKK 635
+P VADVLPKIRT+R E+P+DSG AK+
Sbjct: 376 SPPTVSTVADVLPKIRTVRCVAETPRDSGAAKR 408
Score = 33.5 bits (75), Expect(3) = 3e-23
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 37 NLSPQLRLAQSKIQVSKQRFMTTGSNKTVKKDDRV 141
++SP+ R SKIQ KQ T GS ++VKK+D +
Sbjct: 238 SVSPRSRKNVSKIQFPKQAVTTVGSRRSVKKEDGI 272
>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
gi|223542974|gb|EEF44510.1| conserved hypothetical
protein [Ricinus communis]
Length = 443
Score = 67.4 bits (163), Expect(3) = 1e-18
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +2
Query: 218 VKKDDRVLFGVQPKNLFKEGEQSSFSKRPIKSGRVVASRYSQIPA-QCSGNQTQNDCRKM 394
VKK+D +L +QPK LFK+G++S +K+P+K GRVV SRY+QI Q GN + RK
Sbjct: 264 VKKEDGILASIQPKTLFKDGQKSVPNKKPVKPGRVVPSRYNQIATNQSDGNFS---ARKR 320
Query: 395 SLPGNDKCD--KKRSS 436
SLP +DK D K+R+S
Sbjct: 321 SLPDSDKEDANKRRAS 336
Score = 38.5 bits (88), Expect(3) = 1e-18
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = +3
Query: 477 TEIQVDTSTEALTYKILTHNNPHLGMNVADVLPKIRTIRNRYESPQDSGPAKK 635
+E+ + S +A+ + L +P VADVLPKI+T R+ E+P+DSG AK+
Sbjct: 359 SELVMFKSDDAIVGESLKVKSP-----VADVLPKIKTFRSVNETPRDSGAAKR 406
Score = 32.3 bits (72), Expect(3) = 1e-18
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 34 TNLSPQLRLAQSKIQVSKQRFMTTGSNKTVKKDDRV 141
+++SP+ R SK+Q K T GS K+VKK+D +
Sbjct: 235 SSVSPRSRKNLSKVQAPKMAATTIGSRKSVKKEDGI 270
>gb|ADN33895.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 458
Score = 54.7 bits (130), Expect(3) = 1e-10
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Frame = +2
Query: 224 KDDRVLFGVQPKNLFKEGEQS---SFSKRPIKSGRVVASRYSQIPAQCSGNQTQNDCRKM 394
K D V +QPK LFK+ E+S + K+P+++GR++ASRY+Q +Q + RK
Sbjct: 283 KKDGVFESIQPKKLFKDVEKSVPPTSVKKPLRTGRIIASRYNQTN---ESSQVPTENRKR 339
Query: 395 SLPGN------DKCDKKRSS 436
SLPGN + DK+RSS
Sbjct: 340 SLPGNCKDDGSSRYDKRRSS 359
Score = 34.3 bits (77), Expect(3) = 1e-10
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 558 VADVLPKIRTIRNRYESPQDSGPAKK 635
V D LP+IRT R SP+DSGPAK+
Sbjct: 400 VGDKLPRIRTTRCANMSPRDSGPAKR 425
Score = 21.9 bits (45), Expect(3) = 1e-10
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 37 NLSPQLRLAQSKIQVSKQRFMTTGSNKTVKKD 132
+LSP+ R K Q ++ T S + VKKD
Sbjct: 254 SLSPKSRRTLIKAQTVRKPATTIVSKRPVKKD 285
>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
Length = 466
Score = 63.5 bits (153), Expect(2) = 3e-10
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Frame = +2
Query: 218 VKKDDRVLFGVQPKNLFKEGEQSSFSKRPIKSGRVVASRYSQIPAQCSGNQTQNDCRKMS 397
VKK+ + +QPK LF +GE+S+ K+P+K+GRVVASRYS I Q +G + RK S
Sbjct: 275 VKKELGFVSSIQPKKLFTDGEKSA--KKPLKNGRVVASRYSLIGNQSTGG-CSSSLRKRS 331
Query: 398 LPGND----KCDKKRSS 436
LP N+ +CDK+R+S
Sbjct: 332 LPENEDNGKRCDKRRNS 348
Score = 26.6 bits (57), Expect(2) = 3e-10
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 40 LSPQLRLAQSKIQVSKQRFMTTGSNKTVKKD 132
+SP+ R SK Q SKQ T S + VKK+
Sbjct: 248 VSPKNRKIISKTQASKQAATTIASKRPVKKE 278