BLASTX nr result

ID: Coptis21_contig00016327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016327
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324605.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
dbj|BAK03692.1| predicted protein [Hordeum vulgare subsp. vulgare]     90   2e-16
emb|CBI25555.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]           90   2e-16

>ref|XP_002324605.1| predicted protein [Populus trichocarpa] gi|222866039|gb|EEF03170.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = -2

Query: 225 LPMEEKKKYSINYDGKQDYLQGYGNDLVVSEDQLIEWSDRLYLLIKPLDQREYKYWPDNP 46
           LPMEEK KYS   D  +    GYGND+++SEDQ+++W+DRLYL++ P DQR++K+WP+ P
Sbjct: 106 LPMEEKLKYSRAVDSTE----GYGNDMILSEDQILDWTDRLYLIVSPEDQRQFKFWPEKP 161

Query: 45  NGFRKIINEYSMK 7
             FR+I+ EY+ K
Sbjct: 162 EIFREILQEYTTK 174


>ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|222872945|gb|EEF10076.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/73 (54%), Positives = 56/73 (76%)
 Frame = -2

Query: 225 LPMEEKKKYSINYDGKQDYLQGYGNDLVVSEDQLIEWSDRLYLLIKPLDQREYKYWPDNP 46
           L ME+K+KYS     + D ++GYGND+++S+ Q I+WSDRLYL I P DQR+ K+WP+NP
Sbjct: 101 LSMEDKQKYS----READSIEGYGNDMILSDHQTIDWSDRLYLTISPEDQRKIKFWPENP 156

Query: 45  NGFRKIINEYSMK 7
             FR+ +NEY+MK
Sbjct: 157 KDFRETLNEYTMK 169


>dbj|BAK03692.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 355

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 36/75 (48%), Positives = 57/75 (76%)
 Frame = -2

Query: 225 LPMEEKKKYSINYDGKQDYLQGYGNDLVVSEDQLIEWSDRLYLLIKPLDQREYKYWPDNP 46
           LP+EEK+KYS   +G +  ++GYGND+VVSE Q+++W DRLY++++P ++R Y  WP  P
Sbjct: 103 LPLEEKQKYSNLVNGDEVRIEGYGNDMVVSEKQILDWCDRLYIIVEPENRRIYSLWPTQP 162

Query: 45  NGFRKIINEYSMKTH 1
             FR I++EY+++ H
Sbjct: 163 PSFRDILSEYTVRCH 177


>emb|CBI25555.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = -2

Query: 225 LPMEEKKKYSINYDGKQDYLQGYGNDLVVSEDQLIEWSDRLYLLIKPLDQREYKYWPDNP 46
           LPMEEK+KYS   +     ++GYGND VV+E Q ++W+DRLYLL++P DQR+ K WP+NP
Sbjct: 107 LPMEEKQKYSRTLED----IEGYGNDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENP 162

Query: 45  NGFRKIINEYSMK 7
           + FR  +NEY+ K
Sbjct: 163 DTFRDTLNEYTEK 175


>ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]
          Length = 377

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 40/73 (54%), Positives = 55/73 (75%)
 Frame = -2

Query: 225 LPMEEKKKYSINYDGKQDYLQGYGNDLVVSEDQLIEWSDRLYLLIKPLDQREYKYWPDNP 46
           LPMEEK+KYS   +     ++GYGND VV+E Q ++W+DRLYLL++P DQR+ K WP+NP
Sbjct: 107 LPMEEKQKYSRTLED----IEGYGNDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENP 162

Query: 45  NGFRKIINEYSMK 7
           + FR  +NEY+ K
Sbjct: 163 DTFRDTLNEYTEK 175


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