BLASTX nr result

ID: Coptis21_contig00016293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016293
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33942.1| chloroplast outer envelope protein 34 [Cucumis me...   127   9e-28
ref|XP_004170233.1| PREDICTED: translocase of chloroplast 34-lik...   125   5e-27
ref|XP_004146141.1| PREDICTED: translocase of chloroplast 34-lik...   121   7e-26
sp|Q41009.1|TOC34_PEA RecName: Full=Translocase of chloroplast 3...   117   1e-24
gb|ACF06616.1| Toc34-2 protein [Elaeis guineensis]                    117   1e-24

>gb|ADN33942.1| chloroplast outer envelope protein 34 [Cucumis melo subsp. melo]
          Length = 312

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/88 (67%), Positives = 71/88 (80%)
 Frame = -3

Query: 307 PNGTAWIPHLVEMITEVVLNGSKSILVDKNLIEGPNPNEKNKFLIPLILAVQYFFVVKPI 128
           PNG AWIPHLVE IT VVL GSKSI VDK LIEGPNPN++ K LIPLI A+QYFFVVKPI
Sbjct: 225 PNGIAWIPHLVETITTVVLKGSKSIFVDKTLIEGPNPNQRGKLLIPLIFALQYFFVVKPI 284

Query: 127 QQSIRGDISKEDKPLWELRDTGSGARRF 44
           +++IR DI+++ +P WELRD     R++
Sbjct: 285 KRAIRRDIARQIRPSWELRDMSFSTRKY 312


>ref|XP_004170233.1| PREDICTED: translocase of chloroplast 34-like [Cucumis sativus]
          Length = 312

 Score =  125 bits (313), Expect = 5e-27
 Identities = 57/88 (64%), Positives = 70/88 (79%)
 Frame = -3

Query: 307 PNGTAWIPHLVEMITEVVLNGSKSILVDKNLIEGPNPNEKNKFLIPLILAVQYFFVVKPI 128
           PNG AWIPHLVE IT+VVLNGSKSI VDK LIEGPNPN++ K LIP I A+QY FVVKPI
Sbjct: 225 PNGIAWIPHLVETITKVVLNGSKSIFVDKKLIEGPNPNQRGKMLIPFIFALQYLFVVKPI 284

Query: 127 QQSIRGDISKEDKPLWELRDTGSGARRF 44
           +++IR DI  + +P WELR+    +R++
Sbjct: 285 KRAIRSDILTQSRPSWELREMSFSSRKY 312


>ref|XP_004146141.1| PREDICTED: translocase of chloroplast 34-like [Cucumis sativus]
          Length = 312

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/88 (62%), Positives = 69/88 (78%)
 Frame = -3

Query: 307 PNGTAWIPHLVEMITEVVLNGSKSILVDKNLIEGPNPNEKNKFLIPLILAVQYFFVVKPI 128
           PNG AWIP+LVE IT+VVLNGSKSI VDK LIEGPNPN++ K LIP I  +QY FVVKPI
Sbjct: 225 PNGIAWIPYLVETITKVVLNGSKSIFVDKKLIEGPNPNQRGKMLIPFIFVLQYLFVVKPI 284

Query: 127 QQSIRGDISKEDKPLWELRDTGSGARRF 44
           +++IR DI  + +P WELR+    +R++
Sbjct: 285 KRAIRSDILTQSRPSWELREMSFSSRKY 312


>sp|Q41009.1|TOC34_PEA RecName: Full=Translocase of chloroplast 34; AltName: Full=34 kDa
           chloroplast outer envelope protein; AltName:
           Full=GTP-binding protein IAP34; AltName:
           Full=GTP-binding protein OEP34 gi|510190|emb|CAA82196.1|
           chloroplast outer envelope protein 34 [Pisum sativum]
           gi|3293201|gb|AAC25785.1| GTP-binding protein [Pisum
           sativum]
          Length = 310

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/82 (65%), Positives = 63/82 (76%)
 Frame = -3

Query: 307 PNGTAWIPHLVEMITEVVLNGSKSILVDKNLIEGPNPNEKNKFLIPLILAVQYFFVVKPI 128
           PNG AWIPHLV+ ITEV LN S+SI VDKNLI+GPNPN++ K  IPLI A+QY F+ KPI
Sbjct: 226 PNGIAWIPHLVQTITEVALNKSESIFVDKNLIDGPNPNQRGKLWIPLIFALQYLFLAKPI 285

Query: 127 QQSIRGDISKEDKPLWELRDTG 62
           +  IR DI+ E KP WE RD G
Sbjct: 286 EALIRRDIATETKPAWETRDVG 307


>gb|ACF06616.1| Toc34-2 protein [Elaeis guineensis]
          Length = 312

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = -3

Query: 307 PNGTAWIPHLVEMITEVVLNGSKSILVDKNLIEGPNPNEKNKFLIPLILAVQYFFVVKPI 128
           P+GT WIP+LVE++T V+ NGSK I VD+ LI+GPNPN + K  IPL+LA Q FF VKPI
Sbjct: 225 PDGTPWIPNLVEVLTVVIANGSKPITVDQKLIDGPNPNARGKLFIPLLLAFQDFFRVKPI 284

Query: 127 QQSIRGDISKEDKPLWELRDTGSGARRF 44
           Q++I+ D++KE KPLWELRD G   R F
Sbjct: 285 QKAIKHDMAKESKPLWELRDVGLANRNF 312


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