BLASTX nr result

ID: Coptis21_contig00016287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016287
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255...    95   3e-17
gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides]       92   2e-16
ref|XP_002509888.1| transcription factor, putative [Ricinus comm...    82   2e-13
emb|CBI34417.3| unnamed protein product [Vitis vinifera]               73   1e-10
ref|XP_003533040.1| PREDICTED: uncharacterized protein LOC100784...    72   2e-10

>ref|XP_002276602.1| PREDICTED: uncharacterized protein LOC100255255 [Vitis vinifera]
          Length = 684

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 72/229 (31%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
 Frame = +1

Query: 394 TKILHFGFNSGSASKASTNMSKAIKIGEVGVNCCADTVLRLESPSASL--VSTLKGTKRK 567
           ++  + GF +  +S A  N+  ++++G    N C DT+LRL+SPS+S+  ++  KG KRK
Sbjct: 3   SRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRK 62

Query: 568 WSKSNGLLGPEDGCLLALGLGHPMTSSNSMLGSATGCTGSSLTHH---------ALDIGL 720
           WS  +G  G + G  L+LGLG   +SS+S   SAT CT  S              LD  L
Sbjct: 63  WSLIDGTRGQQVGSSLSLGLGRSSSSSDSKGSSATACTTMSSAKENEEESSMDLELDFTL 122

Query: 721 QLGNEKYLRPHKCA-----------------PVIPGPKFDXXXXXXXXXXXXXXXXXXXE 849
            LGNEK     K A                  +  GP                      +
Sbjct: 123 HLGNEKTPSTKKYAGSSLKALELQTDIDLELSLSTGP----AESDITSIHASSTLLHAMD 178

Query: 850 TPLSGSTAPVVDEGSTSSHWKFGNAV-AQWHALEKRQSSLVGNQVPGKV 993
            PL  + A  +DEGSTSS WK G ++ +  HA   +++SL  +Q+P ++
Sbjct: 179 MPLGVARAAHLDEGSTSSPWKPGTSLSSSLHAPLIKKTSLFSHQIPQRM 227


>gb|ABK96565.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 681

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 71/219 (32%), Positives = 98/219 (44%), Gaps = 21/219 (9%)
 Frame = +1

Query: 391 ETKILHFGFNSGSASKASTNMSKAIKIGEVGVNCCADTVLRLESPSASLVS--TLKGTKR 564
           + +I + GF +   S A   +  ++ +G  G    ADTVLRL+SP +S+    + KG KR
Sbjct: 2   DNRIRNLGFAADYPSNAFKILGSSLSVGAAGTKYSADTVLRLDSPGSSVPYGFSSKGIKR 61

Query: 565 KWSKSNGLLGPEDGCLLALGLGHPMTSSNSMLGSATGCTGSSLTHHA-------LDIGLQ 723
           KW+  NG +G   G  L+LGLG   +SS+S   SAT CT  S            L+  L 
Sbjct: 62  KWNLINGSMGQNVGSSLSLGLGRSSSSSDSKGSSATACTSMSSAIETDEESSMDLEFSLH 121

Query: 724 LGNEKYLRPHKCA-PVIPG--PKFD---------XXXXXXXXXXXXXXXXXXXETPLSGS 867
           LGNEK L P K A   + G  PK D                            + P +  
Sbjct: 122 LGNEKMLSPKKPARSYLKGREPKVDLELGLSTGPSESDVTSIHPPSSSLEFGFDMPSAMG 181

Query: 868 TAPVVDEGSTSSHWKFGNAVAQWHALEKRQSSLVGNQVP 984
            A  V+EGSTS  WK G  +        +++S   NQ+P
Sbjct: 182 GASNVNEGSTSCSWKSGITLLPLQISSNKEASFFFNQIP 220


>ref|XP_002509888.1| transcription factor, putative [Ricinus communis]
            gi|223549787|gb|EEF51275.1| transcription factor,
            putative [Ricinus communis]
          Length = 677

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 80/234 (34%), Positives = 97/234 (41%), Gaps = 28/234 (11%)
 Frame = +1

Query: 391  ETKILHFGFNSGSASKASTNMSKAIKIGEVGVNCCADTVLRLESP--SASLVSTLKGTKR 564
            E K  + GF +   S A   +  +  +G      CADTVLRL+SP  S S  S  KG KR
Sbjct: 2    ENKFQNLGFAATCPSNAFKILGSSTLVGGPVAEYCADTVLRLDSPGSSVSCTSQSKGIKR 61

Query: 565  KWSKSNGLLGPEDGCLLALGLGHPMTSSNSMLGSATGCTGSSLTHHA---------LDIG 717
            KW+  +G +G   G  L+LGLG   +SS+S   SAT CT  S              LD  
Sbjct: 62   KWNFIDGTMGQHIGSSLSLGLGCSSSSSDSKGSSATACTTMSSAKETDEESSIDLELDFA 121

Query: 718  LQLGNEKYLRPHKCA-PVIPG----PKFDXXXXXXXXXXXXXXXXXXXETPLSGST---- 870
            L LGNEK   P K A   + G    PK D                     P S S     
Sbjct: 122  LHLGNEKMSSPKKSANSNLKGLELQPKVDLELSLSTGPSESDVTSIY---PSSTSLDFGM 178

Query: 871  --------APVVDEGSTSSHWKFGNAVAQWHALEKRQSSLVGNQVPGKVSSELS 1008
                    A  VDEG+ S  WK G A+     L  +  S   NQVP K S  +S
Sbjct: 179  EMRHAIYGASSVDEGTISCGWKTGIAL-----LASQDKSFFFNQVP-KTSDPIS 226


>emb|CBI34417.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 5/205 (2%)
 Frame = +1

Query: 394 TKILHFGFNSGSASKASTNMSKAIKIGEVGVNCCADTVLRLESPSASL--VSTLKGTKRK 567
           ++  + GF +  +S A  N+  ++++G    N C DT+LRL+SPS+S+  ++  KG KRK
Sbjct: 3   SRFQNLGFAANHSSNAFKNLGNSMQVGGARANYCMDTILRLDSPSSSIPDLTASKGVKRK 62

Query: 568 WSKSNGLLGPEDGCLLALGLGHPMTSSNSMLGSATGCTGSSLTHHAL--DIGLQLGNEKY 741
           W+K N     E+   + L L   +   N    S     GSSL    L  DI L+L     
Sbjct: 63  WTKEN-----EEESSMDLELDFTLHLGNEKTPSTKKYAGSSLKALELQTDIDLELS---- 113

Query: 742 LRPHKCAPVIPGPKFDXXXXXXXXXXXXXXXXXXXETPLSGSTAPVVDEGSTSSHWKFGN 921
                   +  GP                      + PL  + A  +DEGSTSS WK G 
Sbjct: 114 --------LSTGP----AESDITSIHASSTLLHAMDMPLGVARAAHLDEGSTSSPWKPGT 161

Query: 922 AV-AQWHALEKRQSSLVGNQVPGKV 993
           ++ +  HA   +++SL  +Q+P ++
Sbjct: 162 SLSSSLHAPLIKKTSLFSHQIPQRM 186


>ref|XP_003533040.1| PREDICTED: uncharacterized protein LOC100784837 isoform 1 [Glycine
           max] gi|356528912|ref|XP_003533041.1| PREDICTED:
           uncharacterized protein LOC100784837 isoform 2 [Glycine
           max]
          Length = 682

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 65/201 (32%), Positives = 85/201 (42%), Gaps = 29/201 (14%)
 Frame = +1

Query: 412 GFNSGSASKASTNMSKAIKIGEVGVNCCA-DTVLRLESPSASL---VSTLKGTKRKWSKS 579
           GF +  ++ A   +  ++++   G N    DT+LRL+SP +S+   V + KGTKRKW   
Sbjct: 10  GFAANHSANAFKILGNSMQVEGRGANYHGTDTILRLDSPGSSIPTSVPSYKGTKRKWDLI 69

Query: 580 NGLLGPEDGCLLALGLGHPMTSSNSMLGSATGCTGSSLTHH---------ALDIGLQLGN 732
           +G +G      L+LGLG   +SS+S   SA  CT  S              LD  L LG 
Sbjct: 70  DGCMGQRVDSSLSLGLGRSSSSSDSKGSSAAACTAMSSAKDIDEESSLDIELDFSLHLGC 129

Query: 733 EKYLRPHKCAPVIPG-------PKFD---------XXXXXXXXXXXXXXXXXXXETPLSG 864
           EK     K  PV P        PKFD                            E PL+ 
Sbjct: 130 EKVHSQKK--PVNPSLKTMELQPKFDLELSLSTGPCESDITSVHLNPSPLQLNMEMPLAF 187

Query: 865 STAPVVDEGSTSSHWKFGNAV 927
           S     DEGSTS  WK G A+
Sbjct: 188 SGTQNTDEGSTSCSWKPGIAL 208