BLASTX nr result

ID: Coptis21_contig00016239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016239
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002453756.1| hypothetical protein SORBIDRAFT_04g013780 [S...    74   1e-11
ref|XP_002446099.1| hypothetical protein SORBIDRAFT_06g001760 [S...    73   3e-11
ref|NP_001172545.1| Os01g0722550 [Oryza sativa Japonica Group] g...    72   4e-11
gb|ABA99325.1| hAT family dimerisation domain containing protein...    72   5e-11
gb|ABA98840.1| hAT family dimerisation domain containing protein...    72   5e-11

>ref|XP_002453756.1| hypothetical protein SORBIDRAFT_04g013780 [Sorghum bicolor]
           gi|241933587|gb|EES06732.1| hypothetical protein
           SORBIDRAFT_04g013780 [Sorghum bicolor]
          Length = 262

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 15/118 (12%)
 Frame = +1

Query: 1   KWWFNSSSS-----KVAVRILS*PCSASVCERNWSAFEAA*TKKWNNLLLEMLEDLVYIR 165
           KWW N  SS     K+A RILS  CS+S CER WS FE   TK+ N LL + + DLVYI+
Sbjct: 82  KWWLNHGSSIPNLRKLAARILSLTCSSSACERCWSIFEQVHTKRRNRLLHDRMRDLVYIK 141

Query: 166 MNSMMKMKFVDLEKKDTKAINLDNLG----------ELPEYEEINEEQNVALGNSIGA 309
            NSM++ K  + +K   +   +D L           E  E +  NE +  A G+S G+
Sbjct: 142 FNSMLRQKKANKDKDPLEKPVVDALEDEDNEWITGLEPTEVDPENEGETGAGGSSQGS 199


>ref|XP_002446099.1| hypothetical protein SORBIDRAFT_06g001760 [Sorghum bicolor]
           gi|241937282|gb|EES10427.1| hypothetical protein
           SORBIDRAFT_06g001760 [Sorghum bicolor]
          Length = 217

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
 Frame = +1

Query: 1   KWWFNSSSS-----KVAVRILS*PCSASVCERNWSAFEAA*TKKWNNLLLEMLEDLVYIR 165
           KWW N  SS     K+A RILS  CS+S CER WS FE   TK+ N LL + + DLVYI+
Sbjct: 40  KWWLNHGSSAPNLRKLAARILSLTCSSSACERYWSIFEQVHTKRRNRLLHDRMRDLVYIK 99

Query: 166 MNSMMKMKFVDLEKKDTKAINLDNL 240
            NS+++ K  + +K   +   +D L
Sbjct: 100 FNSLLRQKKANKDKDPLEKTVVDAL 124


>ref|NP_001172545.1| Os01g0722550 [Oryza sativa Japonica Group]
           gi|255673638|dbj|BAH91275.1| Os01g0722550 [Oryza sativa
           Japonica Group]
          Length = 791

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
 Frame = +1

Query: 1   KWWFNSSSS-----KVAVRILS*PCSASVCERNWSAFEAA*TKKWNNLLLEMLEDLVYIR 165
           KWW N  +S     K+A RILS  CS+S CERNWS FE   TKK N LL E + DLV+I+
Sbjct: 619 KWWLNHGTSTLNLRKLAARILSLTCSSSACERNWSVFEQVHTKKRNRLLHERMRDLVFIK 678

Query: 166 MNSMMKMKFVD-----LEKK-DTKAINLDN---LGELPEYEEINEEQNVALGNSIGATTP 318
            NS ++ K  +     +EK+ D    + DN    G +P   E++++       S   TTP
Sbjct: 679 FNSKLRNKRENKGRDPIEKEVDDVVADGDNEFITGVVPSSSEMDQQ---CAKESQQHTTP 735

Query: 319 ASATP 333
            +  P
Sbjct: 736 QAPAP 740


>gb|ABA99325.1| hAT family dimerisation domain containing protein [Oryza sativa
            Japonica Group]
          Length = 820

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
 Frame = +1

Query: 1    KWWFNSSSS-----KVAVRILS*PCSASVCERNWSAFEAA*TKKWNNLLLEMLEDLVYIR 165
            KWW N  +S     K+A RILS  CS+S CERNWS FE   TKK N LL E + DLV+++
Sbjct: 635  KWWLNHGTSTPNLRKLAARILSLTCSSSACERNWSVFEQVHTKKRNRLLHERMRDLVFVK 694

Query: 166  MNSMMKMKFVD-----LEKK-DTKAINLDN---LGELPEYEEINEEQNVALGNSIGATTP 318
             NS ++ K  +     +EK+ D    + DN    G +P   E++++       S   TTP
Sbjct: 695  FNSKLRNKRENKGRDPIEKEVDDVVADGDNEFITGVVPSSSEMDQQ---CAKESQQHTTP 751

Query: 319  ASATP 333
             +  P
Sbjct: 752  QAPAP 756


>gb|ABA98840.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 800

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
 Frame = +1

Query: 1   KWWFNSSSS-----KVAVRILS*PCSASVCERNWSAFEAA*TKKWNNLLLEMLEDLVYIR 165
           KWW N  +S     K+A RILS  CS+S CERNWS FE   TKK N LL E + DLV ++
Sbjct: 618 KWWLNHGTSTPNLRKLAARILSLTCSSSACERNWSVFEQVHTKKRNRLLHERMRDLVCVK 677

Query: 166 MNSMMKMKFVD-----LEKK-DTKAINLDN---LGELPEYEEINEEQNVALGNSIGATTP 318
            NS ++ K  +     +EK+ D    ++DN    G +P   E++++       S   TTP
Sbjct: 678 FNSKLRNKRENKGRDPIEKEVDDVVADVDNEFITGVVPSSSEMDQQ---CAKESQQHTTP 734

Query: 319 ASATP 333
            +  P
Sbjct: 735 QAPAP 739


Top