BLASTX nr result

ID: Coptis21_contig00016231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016231
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514089.1| conserved hypothetical protein [Ricinus comm...   111   5e-23
ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   109   2e-22
ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
emb|CBI35923.3| unnamed protein product [Vitis vinifera]              104   7e-21
ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_002514089.1| conserved hypothetical protein [Ricinus communis]
           gi|223546545|gb|EEF48043.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score =  111 bits (278), Expect = 5e-23
 Identities = 64/146 (43%), Positives = 84/146 (57%), Gaps = 8/146 (5%)
 Frame = -3

Query: 425 KNKTQPTMPQPTQEESPRPRKPT------TPAGRPPLPFKLNS--FYDENLNNGNQSXXX 270
           K K  P  P P    S  PR PT         GRPPLP ++N+  +Y+EN+N+G QS   
Sbjct: 355 KRKAPPPPPPPPPAPSTPPRAPTQRRNHTATTGRPPLPTRVNNNNWYEENVNSGGQSPLI 414

Query: 269 XXXXXXXXXPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPT 90
                    PF++PG KF V+GDYV+++S+HSSR +SP+L+ V+          +T T  
Sbjct: 415 PMPPPPPPPPFRVPGFKFAVKGDYVKVRSAHSSRCSSPELEEVD--------RQSTDTVN 466

Query: 89  GEAGVSVFCPSPDVNTKADTFIARFR 12
              G SVFC SPDVN KAD+FIAR R
Sbjct: 467 MMEGGSVFCLSPDVNLKADSFIARLR 492


>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score =  109 bits (273), Expect = 2e-22
 Identities = 62/135 (45%), Positives = 86/135 (63%), Gaps = 2/135 (1%)
 Frame = -3

Query: 410 PTMPQPTQEESPRPRKPTTPAGRPPLPFKLNSFY--DENLNNGNQSXXXXXXXXXXXXPF 237
           PT P P   ++ R R     AG+PPLP + +SFY  D+N+N+G QS             F
Sbjct: 402 PTPPPPPPPDTSRRRA----AGKPPLPARKSSFYNRDDNVNSGGQSPLIPMPPPPPP--F 455

Query: 236 KMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVFCPS 57
           +MP +K+VVRGD+VR++S+HSSR +SP+LD V+       S++ ++   G+A  + FCPS
Sbjct: 456 RMPELKYVVRGDFVRIRSTHSSRCSSPELDDVDL------SSNKSAMDGGDAIGATFCPS 509

Query: 56  PDVNTKADTFIARFR 12
           PDVN KADTFIAR R
Sbjct: 510 PDVNVKADTFIARLR 524


>ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|222839729|gb|EEE78052.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/164 (40%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
 Frame = -3

Query: 431 NRKNKTQPTMPQP---------------TQEESPRPRKPTTP--AGRPPLPFKLNSFY-- 309
           ++K KT+   P P               +Q+ + R +    P  + +PP P K   F+  
Sbjct: 370 SKKGKTKKLHPVPPPPPPPPVTRVSKVVSQKVTSRTKVQVAPLTSDKPPEPAKTRRFHSV 429

Query: 308 DENLNNGNQSXXXXXXXXXXXXPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPT 129
           +EN+  GN S            PFKMP  KFV  GDYVR+ S +SSR  SPDLDS+E  +
Sbjct: 430 EENVERGNASRLIPLPPPPPPPPFKMPAWKFVHDGDYVRVGSFNSSRSGSPDLDSIEDAS 489

Query: 128 SIHESNSNTSTPTG--EAGVSVFCPSPDVNTKADTFIARFRAGL 3
           S  + +S  +  +G   A  ++FCPSPDVNTKAD FIARFRAGL
Sbjct: 490 SEKDQSSPVAAASGSDSAATALFCPSPDVNTKADNFIARFRAGL 533


>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  104 bits (260), Expect = 7e-21
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
 Frame = -3

Query: 350 AGRPPLPFKLNSF--YDENLNNGNQSXXXXXXXXXXXXP-FKMPGIKFVVRGDYVRLQSS 180
           A +PP+P K +SF   D N   G++S            P FKMP  KFVV GDYVR++S+
Sbjct: 451 ASKPPIPEKSSSFNSVDGNPYAGSESLLIPVPPPPPPPPPFKMPDWKFVVHGDYVRIKST 510

Query: 179 HSSRGNSPDLDSVETPTSIHESNS---NTSTPTGEAGVSVFCPSPDVNTKADTFIARFRA 9
           +SSR  SPDLD + +P+S   S S    + T  G++   +FCPSPDVNTKADTFIARFRA
Sbjct: 511 NSSRSGSPDLDYIGSPSSKGPSRSTSLKSETEGGDSAQPLFCPSPDVNTKADTFIARFRA 570

Query: 8   GL 3
           GL
Sbjct: 571 GL 572


>ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|222855179|gb|EEE92726.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/140 (44%), Positives = 84/140 (60%)
 Frame = -3

Query: 425 KNKTQPTMPQPTQEESPRPRKPTTPAGRPPLPFKLNSFYDENLNNGNQSXXXXXXXXXXX 246
           ++K+Q  +P P   E PR R+ +T  G+PPLP  +N+ Y +N+NNG QS           
Sbjct: 388 RHKSQVPLPPP---EPPRRRRSST-TGQPPLPTGVNNLYVDNVNNGGQSPLVAMPPLPPP 443

Query: 245 XPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVF 66
            P +MPG +FV RGD V  +S+  SR +SPD + V+  +S  ++ + T    G  G S F
Sbjct: 444 PPCQMPGFQFVPRGDLVEKRSAQGSRCSSPDSEEVDKESS-RQTVNKTDGKDGIGGPS-F 501

Query: 65  CPSPDVNTKADTFIARFRAG 6
           CPSPDVN KADTFIAR R G
Sbjct: 502 CPSPDVNMKADTFIARLRDG 521


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