BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016216
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32027.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   105   4e-21
ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig...   103   1e-20
ref|XP_002520151.1| protein with unknown function [Ricinus commu...   102   3e-20
ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi...   100   1e-19

>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 2/81 (2%)
 Frame = -1

Query: 240 GQLGHGDFQSQCLPIEVMYFRSRHVEQIACGMRHTLVLLKGN--SGDALYGFGSGKRGQL 67
           GQLGHGD +S C P++V YF S+HV+QIACGMRH+LVLLKG   SGD +YGFGSGKRGQL
Sbjct: 138 GQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQL 197

Query: 66  GTSMDMITKSLNLPQVIFGFQ 4
           G SMD  T+S+++PQ   G +
Sbjct: 198 GVSMDN-TRSISVPQATVGLE 217


>ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/79 (64%), Positives = 63/79 (79%)
 Frame = -1

Query: 240 GQLGHGDFQSQCLPIEVMYFRSRHVEQIACGMRHTLVLLKGNSGDALYGFGSGKRGQLGT 61
           GQLGHGD +S C P++V YF S+HV+QIACGMRH+LVLLK   GD +YGFGSGKRGQLG 
Sbjct: 130 GQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLK---GDQVYGFGSGKRGQLGV 186

Query: 60  SMDMITKSLNLPQVIFGFQ 4
           SMD  T+S+++PQ   G +
Sbjct: 187 SMDN-TRSISVPQATVGLE 204


>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/79 (63%), Positives = 62/79 (78%)
 Frame = -1

Query: 240 GQLGHGDFQSQCLPIEVMYFRSRHVEQIACGMRHTLVLLKGNSGDALYGFGSGKRGQLGT 61
           GQLGHGD  S C P++V  F  +HVEQ+ACGMRH+LVLLKGN    +YGFGSGKRGQLG 
Sbjct: 134 GQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQ---VYGFGSGKRGQLGV 190

Query: 60  SMDMITKSLNLPQVIFGFQ 4
           S D + KS+N+P+V+ GF+
Sbjct: 191 SNDRV-KSVNVPKVVSGFE 208


>ref|XP_002520151.1| protein with unknown function [Ricinus communis]
           gi|223540643|gb|EEF42206.1| protein with unknown
           function [Ricinus communis]
          Length = 387

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/79 (65%), Positives = 60/79 (75%)
 Frame = -1

Query: 240 GQLGHGDFQSQCLPIEVMYFRSRHVEQIACGMRHTLVLLKGNSGDALYGFGSGKRGQLGT 61
           GQLGHGD  S   P++V YF +RHV QIACGMRH+LVLLKGN    +YGFGSGKRGQLG 
Sbjct: 138 GQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQ---VYGFGSGKRGQLGI 194

Query: 60  SMDMITKSLNLPQVIFGFQ 4
           S D I KS++LP V  GF+
Sbjct: 195 SKDKI-KSISLPLVTCGFE 212


>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355514908|gb|AES96531.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 615

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/79 (63%), Positives = 61/79 (77%)
 Frame = -1

Query: 240 GQLGHGDFQSQCLPIEVMYFRSRHVEQIACGMRHTLVLLKGNSGDALYGFGSGKRGQLGT 61
           GQLGHGD+ S   PI+V  F  ++V Q+ACGMRH+LVLLKG   + +YGFGSGKRGQLG 
Sbjct: 358 GQLGHGDYASHSSPIKVSSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGV 417

Query: 60  SMDMITKSLNLPQVIFGFQ 4
           S D I KS+NLP+VI GF+
Sbjct: 418 SKDKI-KSINLPKVISGFE 435