BLASTX nr result

ID: Coptis21_contig00016203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016203
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524888.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002891451.1| hypothetical protein ARALYDRAFT_474010 [Arab...    59   4e-07
gb|ABK28077.1| unknown [Arabidopsis thaliana]                          59   4e-07
ref|NP_001077689.1| uncharacterized protein [Arabidopsis thalian...    59   4e-07

>ref|XP_002524888.1| conserved hypothetical protein [Ricinus communis]
           gi|223535851|gb|EEF37512.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/68 (35%), Positives = 31/68 (45%)
 Frame = -1

Query: 269 TGCCYQVTECGISVCALCICCPLTILWCAVKFPCKVAWLIGKRLMDSNCCRPDNMRVISA 90
           T C ++  E   S C  C+ CPL I+WC VK PCK+ W   K +    CC       + A
Sbjct: 12  TDCHHKAAEFACSACLFCVACPLCIVWCCVKLPCKIGWKAAKNVRHWICCGSQEKVDLMA 71

Query: 89  SSSFSDTG 66
                D G
Sbjct: 72  VLGLQDIG 79


>ref|XP_002891451.1| hypothetical protein ARALYDRAFT_474010 [Arabidopsis lyrata subsp.
           lyrata] gi|297337293|gb|EFH67710.1| hypothetical protein
           ARALYDRAFT_474010 [Arabidopsis lyrata subsp. lyrata]
          Length = 128

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
 Frame = -1

Query: 248 TECGISVCALCICCPLTILWCAVKFPCKVAW---LIGKRLMD--SNCCRPDNMRVISAS- 87
           +E   +VC LC+ CPL +LWC +K PC + W   L  KR +   S C R  + RV++A  
Sbjct: 46  SEVAFNVCCLCVYCPLCVLWCCIKQPCTIGWRAILNAKRRLSGCSGCGRSFSRRVLAADY 105

Query: 86  SSFSDTGRED 57
           SSFSD   +D
Sbjct: 106 SSFSDIDSDD 115


>gb|ABK28077.1| unknown [Arabidopsis thaliana]
          Length = 126

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
 Frame = -1

Query: 248 TECGISVCALCICCPLTILWCAVKFPCKVAW---LIGKRLMD--SNCCRPDNMRVISAS- 87
           +E   +VC LC+ CPL +LWC +K PC + W   L  KR +   S C R  + RV++A  
Sbjct: 43  SEVAFNVCCLCVYCPLCVLWCCIKQPCTIGWRAILNAKRRLSGCSGCGRSFSRRVLAADY 102

Query: 86  SSFSDTGRED 57
           SSFSD   +D
Sbjct: 103 SSFSDIDSDD 112


>ref|NP_001077689.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98962177|gb|ABF59418.1| unknown protein [Arabidopsis
           thaliana] gi|110739502|dbj|BAF01660.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194222|gb|AEE32343.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 125

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
 Frame = -1

Query: 248 TECGISVCALCICCPLTILWCAVKFPCKVAW---LIGKRLMD--SNCCRPDNMRVISAS- 87
           +E   +VC LC+ CPL +LWC +K PC + W   L  KR +   S C R  + RV++A  
Sbjct: 43  SEVAFNVCCLCVYCPLCVLWCCIKQPCTIGWRAILNAKRRLSGCSGCGRSFSRRVLAADY 102

Query: 86  SSFSDTGRED 57
           SSFSD   +D
Sbjct: 103 SSFSDIDSDD 112


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