BLASTX nr result

ID: Coptis21_contig00016193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016193
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328075.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002313649.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_003606264.1| hypothetical protein MTR_4g055410 [Medicago ...    62   4e-08
ref|XP_002527462.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>ref|XP_002328075.1| predicted protein [Populus trichocarpa] gi|222837590|gb|EEE75955.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
 Frame = +3

Query: 54  LDLLVEAARLISGNFENVDEEMKVETKVDNDDEKN----WMLECYDDFEDISPVVRSKRG 221
           L LL+EAA + SGN E+ + + +   +  +  +K+    W+++ Y+D    SPVVRSKRG
Sbjct: 217 LALLIEAAEMFSGNLEDKESDSEKLEETTSGSKKSCKCSWVVDLYED-NTSSPVVRSKRG 275

Query: 222 RTQVLPYRYRDS--VLEPWKRLTK 287
           R+QVLPYRYRDS  +LEPWKRL +
Sbjct: 276 RSQVLPYRYRDSSVLLEPWKRLPR 299


>ref|XP_002313649.1| predicted protein [Populus trichocarpa] gi|222850057|gb|EEE87604.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
 Frame = +3

Query: 54  LDLLVEAARLISGNFENVDEEMKVETKVDNDDEKNWMLECYDDFEDISPVVRSKRGRTQV 233
           LDLL+EAA ++SGN E+ + +   + +     + + +++ Y+D    SPV+RSKR R+QV
Sbjct: 219 LDLLIEAAEMVSGNSEDKESDSDKQEETKRSRKCSLVVDLYED-NTSSPVIRSKRRRSQV 277

Query: 234 LPYRYRDS--VLEPWKRLTKQRSS 299
           LP+RYRDS  +LEPWKRL K + +
Sbjct: 278 LPHRYRDSSVLLEPWKRLPKPQKA 301


>ref|XP_003606264.1| hypothetical protein MTR_4g055410 [Medicago truncatula]
           gi|355507319|gb|AES88461.1| hypothetical protein
           MTR_4g055410 [Medicago truncatula]
          Length = 193

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/92 (44%), Positives = 51/92 (55%)
 Frame = +3

Query: 36  RKKEGYLDLLVEAARLISGNFENVDEEMKVETKVDNDDEKNWMLECYDDFEDISPVVRSK 215
           R    YLDLL+EAAR++S    +  EE +  T  +       M     D  +  PVVRSK
Sbjct: 96  RGDNNYLDLLIEAARVLSEKNGSDLEESEKRTGTE------LMARVVVDLYENEPVVRSK 149

Query: 216 RGRTQVLPYRYRDSVLEPWKRLTKQRSSRVCS 311
           RGR Q LP R+RDSV+EP KR  K R  R+ S
Sbjct: 150 RGRNQALPCRFRDSVIEPLKR--KDRKLRLSS 179


>ref|XP_002527462.1| conserved hypothetical protein [Ricinus communis]
           gi|223533197|gb|EEF34954.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +3

Query: 33  SRKKEGYLDLLVEAARLISGNFENVDEEMKVETKVDNDDEKNWMLECYDDFEDISPVVRS 212
           +RK    L LL++AA ++SGN +++                N   +       ISPV RS
Sbjct: 174 NRKSNDCLSLLIQAAEMVSGNLQDI----------------NPTSQAVRHGGAISPVARS 217

Query: 213 KRGRTQVLPYRYRDSV-LEPWKRLTK 287
           KRGR+ VLP RYRDSV LEPWKRL +
Sbjct: 218 KRGRSHVLPSRYRDSVFLEPWKRLPR 243


Top