BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016191
         (1566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glyc...   281   4e-73
ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   281   4e-73
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   278   2e-72
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   277   6e-72
ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis tha...   274   4e-71

>ref|NP_001238693.1| DNA polymerase delta catalytic subunit [Glycine max]
            gi|3913525|sp|O48901.1|DPOD1_SOYBN RecName: Full=DNA
            polymerase delta catalytic subunit
            gi|2895198|gb|AAC18443.1| DNA polymerase delta [Glycine
            max]
          Length = 1088

 Score =  281 bits (718), Expect = 4e-73
 Identities = 134/165 (81%), Positives = 148/165 (89%)
 Frame = -2

Query: 1565 GILGRGIQIDGLGTKSFVTYESNVLFALRFMIDCDIVGGNCIEVPVGKYKKAVRTMS*CQ 1386
            GIL RGIQ+DGLG KSF+TYESNVLFALRFMIDC+IVGGN I +P GKYKK  +++S CQ
Sbjct: 187  GILDRGIQLDGLGMKSFLTYESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAKSLSYCQ 246

Query: 1385 LEFDCLYSELISHAPEGEFSKMAPFQILSFDIECAGRKGHFPEQTHDPVIQVANLATLQG 1206
            LEFDCLYSELISHAPEGE+SKMAPF+ILSFDIECAGRKGHFPE THDPVIQ+ANL TLQG
Sbjct: 247  LEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLVTLQG 306

Query: 1205 ESQPFVRNIMTLKSCSPIVGADVMSFENEREVLLAWRDELVKEQD 1071
            E QPF+RN+MTLKSCSPIVG DVM FE EREVLLAWRD  ++E D
Sbjct: 307  EDQPFIRNVMTLKSCSPIVGVDVMPFETEREVLLAWRD-FIREVD 350


>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
            gi|296088521|emb|CBI37512.3| unnamed protein product
            [Vitis vinifera]
          Length = 1089

 Score =  281 bits (718), Expect = 4e-73
 Identities = 136/165 (82%), Positives = 146/165 (88%)
 Frame = -2

Query: 1565 GILGRGIQIDGLGTKSFVTYESNVLFALRFMIDCDIVGGNCIEVPVGKYKKAVRTMS*CQ 1386
            GIL RGIQI+G G K+FVTYESNVLFALRFM+DC+IVGGN IEVP GKYKK  + +S CQ
Sbjct: 214  GILDRGIQIEGFGMKNFVTYESNVLFALRFMVDCNIVGGNWIEVPAGKYKKTAKNLSYCQ 273

Query: 1385 LEFDCLYSELISHAPEGEFSKMAPFQILSFDIECAGRKGHFPEQTHDPVIQVANLATLQG 1206
            LEFDCLYSEL SH PEGEFSKMAPF+ILSFDIECAGRKGHFPE THDPVIQVANL TLQG
Sbjct: 274  LEFDCLYSELTSHIPEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 333

Query: 1205 ESQPFVRNIMTLKSCSPIVGADVMSFENEREVLLAWRDELVKEQD 1071
            E QPFVRN+MTLKSCSPIVG DVMSFE EREVLLAWRD  ++E D
Sbjct: 334  EDQPFVRNVMTLKSCSPIVGVDVMSFETEREVLLAWRD-FIREVD 377


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
            sativus]
          Length = 1086

 Score =  278 bits (712), Expect = 2e-72
 Identities = 134/165 (81%), Positives = 149/165 (90%)
 Frame = -2

Query: 1565 GILGRGIQIDGLGTKSFVTYESNVLFALRFMIDCDIVGGNCIEVPVGKYKKAVRTMS*CQ 1386
            GIL RGIQI+G G KSF+TYESNVLFALRFMIDC++VGGN IEVPVGKYKK VR++S CQ
Sbjct: 211  GILDRGIQIEGFGMKSFMTYESNVLFALRFMIDCNVVGGNWIEVPVGKYKKTVRSLSYCQ 270

Query: 1385 LEFDCLYSELISHAPEGEFSKMAPFQILSFDIECAGRKGHFPEQTHDPVIQVANLATLQG 1206
            LEFDCLYS+LISHAPEGEFSKMAPF+ILSFDIECAGRKGHFPE T DPVIQVANL TLQG
Sbjct: 271  LEFDCLYSDLISHAPEGEFSKMAPFRILSFDIECAGRKGHFPEPTQDPVIQVANLVTLQG 330

Query: 1205 ESQPFVRNIMTLKSCSPIVGADVMSFENEREVLLAWRDELVKEQD 1071
            E QPFVRN+MTL +CSPI G DV+SF+ ER+VLLAWRD L++E D
Sbjct: 331  EDQPFVRNVMTLNTCSPIAGVDVLSFDTERDVLLAWRD-LIREVD 374


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
            predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  277 bits (708), Expect = 6e-72
 Identities = 134/165 (81%), Positives = 148/165 (89%)
 Frame = -2

Query: 1565 GILGRGIQIDGLGTKSFVTYESNVLFALRFMIDCDIVGGNCIEVPVGKYKKAVRTMS*CQ 1386
            GIL +GIQIDGLG +SF+TYESNVLFALRFMIDC++VGGN IEVP GKYKK  +++S CQ
Sbjct: 206  GILDKGIQIDGLGMRSFMTYESNVLFALRFMIDCNVVGGNWIEVPAGKYKKTSKSLSNCQ 265

Query: 1385 LEFDCLYSELISHAPEGEFSKMAPFQILSFDIECAGRKGHFPEQTHDPVIQVANLATLQG 1206
            LEFDCLYSELISHA EGEFSKMAPF+ILSFDIECAGRKGHFPE THDPVIQVANL TLQG
Sbjct: 266  LEFDCLYSELISHAAEGEFSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQVANLVTLQG 325

Query: 1205 ESQPFVRNIMTLKSCSPIVGADVMSFENEREVLLAWRDELVKEQD 1071
            E QPFVRNIMTL SCSPIVG DVMSF+ EREVL+AW+ E ++E D
Sbjct: 326  EDQPFVRNIMTLNSCSPIVGVDVMSFDTEREVLIAWK-EFIREVD 369


>ref|NP_201201.2| DNA polymerase delta subunit 1 [Arabidopsis thaliana]
            gi|322510022|sp|Q9LVN7.2|DPOD1_ARATH RecName: Full=DNA
            polymerase delta catalytic subunit; AltName: Full=Protein
            EMBRYO DEFECTIVE 2780 gi|76262800|gb|ABA41487.1|
            DNA-directed DNA polymerase delta catalytic subunit
            [Arabidopsis thaliana] gi|332010438|gb|AED97821.1| DNA
            polymerase delta subunit 1 [Arabidopsis thaliana]
          Length = 1095

 Score =  274 bits (701), Expect = 4e-71
 Identities = 131/165 (79%), Positives = 145/165 (87%)
 Frame = -2

Query: 1565 GILGRGIQIDGLGTKSFVTYESNVLFALRFMIDCDIVGGNCIEVPVGKYKKAVRTMS*CQ 1386
            GIL RG+QIDGLG KSF TYESN+LF LRFM+DCDIVGGN IEVP GKYKK  RT+S CQ
Sbjct: 222  GILDRGLQIDGLGMKSFQTYESNILFVLRFMVDCDIVGGNWIEVPTGKYKKNARTLSYCQ 281

Query: 1385 LEFDCLYSELISHAPEGEFSKMAPFQILSFDIECAGRKGHFPEQTHDPVIQVANLATLQG 1206
            LEF CLYS+LISHA EGE+SKMAPF++LSFDIECAGRKGHFPE  HDPVIQ+ANL TLQG
Sbjct: 282  LEFHCLYSDLISHAAEGEYSKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQG 341

Query: 1205 ESQPFVRNIMTLKSCSPIVGADVMSFENEREVLLAWRDELVKEQD 1071
            E  PFVRN+MTLKSC+PIVG DVMSFE EREVLLAWRD L+++ D
Sbjct: 342  EDHPFVRNVMTLKSCAPIVGVDVMSFETEREVLLAWRD-LIRDVD 385