BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016189
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    60   1e-07

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +3

Query: 96  FYTT--DTNLFKRISSVGDQTVSVVPLLQQWVIEEERSVTEDKLNNFIKYLKARKRFKHA 269
           FY+T    NL++RIS VGD  +SV PLL QWV+ E R V +D+L + IK L+  KRFKHA
Sbjct: 22  FYSTVVKDNLYRRISPVGDPNISVTPLLDQWVL-EGRLVQQDELRHIIKELRVYKRFKHA 80

Query: 270 LE 275
           LE
Sbjct: 81  LE 82


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +3

Query: 96  FYTT--DTNLFKRISSVGDQTVSVVPLLQQWVIEEERSVTEDKLNNFIKYLKARKRFKHA 269
           FY+T    NL++RIS VGD  +SV PLL QWV+ E R V +D+L + IK L+  KRFKHA
Sbjct: 22  FYSTVVKDNLYRRISPVGDPNISVTPLLDQWVL-EGRLVQQDELRHIIKELRVYKRFKHA 80

Query: 270 LE 275
           LE
Sbjct: 81  LE 82


>ref|XP_004168986.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 191

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +3

Query: 96  FYTT--DTNLFKRISSVGDQTVSVVPLLQQWVIEEERSVTEDKLNNFIKYLKARKRFKHA 269
           FY+T    +L++RIS VGD  +SV PLL QWV+ E   V +D+L + IK L+  KRFKHA
Sbjct: 22  FYSTVVKDSLYRRISPVGDPNISVTPLLDQWVL-ESGLVQQDELRHIIKELRVYKRFKHA 80

Query: 270 LE 275
           LE
Sbjct: 81  LE 82


>ref|XP_004146650.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 222

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = +3

Query: 96  FYTT--DTNLFKRISSVGDQTVSVVPLLQQWVIEEERSVTEDKLNNFIKYLKARKRFKHA 269
           FY+T    +L++RIS VGD  +SV PLL QWV+ E   V +D+L + IK L+  KRFKHA
Sbjct: 22  FYSTVVKDSLYRRISPVGDPNISVTPLLDQWVL-ESGLVQQDELRHIIKELRVYKRFKHA 80

Query: 270 LE 275
           LE
Sbjct: 81  LE 82


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = +3

Query: 117 LFKRISSVGDQTVSVVPLLQQWVIEEERSVTEDKLNNFIKYLKARKRFKHALE 275
           L++RIS VGD  VS+VP+L QW IEE +SV +D+L  FIK L+  KR+ HALE
Sbjct: 51  LYRRISPVGDPKVSIVPILDQW-IEEGKSVNKDQLQVFIKELRYCKRYTHALE 102