BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016187
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]         97   1e-18
ref|NP_188886.1| pentatricopeptide repeat-containing protein [Ar...    97   1e-18
gb|ABQ50548.1| hypothetical protein [Brassica rapa]                    97   2e-18
gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]               96   4e-18
ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing prote...    96   4e-18

>dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G +PD+V+YSILIN YCKAKR+D  +++F+E+  KG  PNTITYNTL+ GFC+SG+++ A
Sbjct: 409 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 468

Query: 183 KELLKDMIACGEKP 224
           KEL ++M++ G  P
Sbjct: 469 KELFQEMVSRGVPP 482



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = +3

Query: 12  PDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAKEL 191
           PDVV++S LI+ + K  ++ +A +++ EM  +G  P+TITYN+LIDGFCK   +  A ++
Sbjct: 342 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 401

Query: 192 LKDMIACGEKPD 227
              M++ G +PD
Sbjct: 402 FDLMVSKGCEPD 413



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           +K  VV YSI+I+  CK    D A+ +F EM++KG K + +TY++LI G C  G+     
Sbjct: 270 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 329

Query: 186 ELLKDMIACGEKPD 227
           ++L++MI     PD
Sbjct: 330 KMLREMIGRNIIPD 343



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G+K DVV+YS LI G C   + D   ++ +EM  +   P+ +T++ LID F K G++  A
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 363

Query: 183 KELLKDMIACGEKPD 227
           KEL  +MI  G  PD
Sbjct: 364 KELYNEMITRGIAPD 378



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/75 (37%), Positives = 48/75 (64%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G++ D+ + +I+IN YC+ K++  A  V       G++P+TIT++TL++GFC  G VS A
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 183 KELLKDMIACGEKPD 227
             L+  M+   ++PD
Sbjct: 189 VALVDRMVEMKQRPD 203



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +3

Query: 27  YSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAKELLKDMI 206
           Y+I+I+G C A ++D A  +F  +  KG KP+ +TYN +I G CK G +S A  L + M 
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581

Query: 207 ACGEKPD 227
             G  PD
Sbjct: 582 EDGCTPD 588



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 45/75 (60%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G +PD +++S L+NG+C   R+ +AV +   M     +P+ +T +TLI+G C  G VS A
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 183 KELLKDMIACGEKPD 227
             L+  M+  G +PD
Sbjct: 224 LVLIDRMVEYGFQPD 238



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 44/75 (58%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G+KPDVV+Y+++I G CK   + +A  +F++M+  G  P+  TYN LI        +  +
Sbjct: 549 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 608

Query: 183 KELLKDMIACGEKPD 227
            EL+++M  CG   D
Sbjct: 609 VELIEEMKVCGFSAD 623


>ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
           gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis
           thaliana] gi|51968798|dbj|BAD43091.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332643122|gb|AEE76643.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/74 (56%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G +PD+V+YSILIN YCKAKR+D  +++F+E+  KG  PNTITYNTL+ GFC+SG+++ A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439

Query: 183 KELLKDMIACGEKP 224
           KEL ++M++ G  P
Sbjct: 440 KELFQEMVSRGVPP 453



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/72 (41%), Positives = 49/72 (68%)
 Frame = +3

Query: 12  PDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAKEL 191
           PDVV++S LI+ + K  ++ +A +++ EM  +G  P+TITYN+LIDGFCK   +  A ++
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372

Query: 192 LKDMIACGEKPD 227
              M++ G +PD
Sbjct: 373 FDLMVSKGCEPD 384



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           +K  VV YSI+I+  CK    D A+ +F EM++KG K + +TY++LI G C  G+     
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300

Query: 186 ELLKDMIACGEKPD 227
           ++L++MI     PD
Sbjct: 301 KMLREMIGRNIIPD 314



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G+K DVV+YS LI G C   + D   ++ +EM  +   P+ +T++ LID F K G++  A
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334

Query: 183 KELLKDMIACGEKPD 227
           KEL  +MI  G  PD
Sbjct: 335 KELYNEMITRGIAPD 349



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/75 (37%), Positives = 48/75 (64%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G++ D+ + +I+IN YC+ K++  A  V       G++P+TIT++TL++GFC  G VS A
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 183 KELLKDMIACGEKPD 227
             L+  M+   ++PD
Sbjct: 160 VALVDRMVEMKQRPD 174



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +3

Query: 27  YSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAKELLKDMI 206
           Y+I+I+G C A ++D A  +F  +  KG KP+ +TYN +I G CK G +S A  L + M 
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552

Query: 207 ACGEKPD 227
             G  PD
Sbjct: 553 EDGCTPD 559



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/75 (37%), Positives = 45/75 (60%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G +PD +++S L+NG+C   R+ +AV +   M     +P+ +T +TLI+G C  G VS A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 183 KELLKDMIACGEKPD 227
             L+  M+  G +PD
Sbjct: 195 LVLIDRMVEYGFQPD 209



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/75 (36%), Positives = 44/75 (58%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G+KPDVV+Y+++I G CK   + +A  +F++M+  G  P+  TYN LI        +  +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579

Query: 183 KELLKDMIACGEKPD 227
            EL+++M  CG   D
Sbjct: 580 VELIEEMKVCGFSAD 594


>gb|ABQ50548.1| hypothetical protein [Brassica rapa]
          Length = 229

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 39/75 (52%), Positives = 62/75 (82%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G  PD+V+++ILINGYCKAK +D+ ++VF+E+ L+G   +T+TYNTL+ GFC++G++ VA
Sbjct: 41  GCDPDIVTFNILINGYCKAKLVDEGMRVFREISLRGLVADTVTYNTLVQGFCEAGKLDVA 100

Query: 183 KELLKDMIACGEKPD 227
           KEL ++M++ G +PD
Sbjct: 101 KELFQEMVSQGARPD 115



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/70 (40%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           GL  D V+Y+ L+ G+C+A ++D A ++F+EM  +G +P+ +TY  L+DG C +GE+  A
Sbjct: 76  GLVADTVTYNTLVQGFCEAGKLDVAKELFQEMVSQGARPDIVTYRILLDGLCDNGELQEA 135

Query: 183 KELLKDMIAC 212
            ++L+ M  C
Sbjct: 136 LDILEKMQKC 145


>gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/75 (54%), Positives = 56/75 (74%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G  PDVV++S LINGYCKAKR+D  +++F EM  +G   NT+TY TLI GFC+ G++  A
Sbjct: 190 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 249

Query: 183 KELLKDMIACGEKPD 227
           ++LL +MI+CG  PD
Sbjct: 250 QDLLNEMISCGVAPD 264



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           + PD+V++S LIN + K +++ +A +++KEM      P TITYN++IDGFCK   V  AK
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 186 ELLKDMIACGEKPD 227
            +L  M + G  PD
Sbjct: 181 RMLDSMASKGCSPD 194



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 41/74 (55%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           +K DVV  + +++  CK      A  +F EM  KG  PN +TYN +ID FC SG  S A 
Sbjct: 51  IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 110

Query: 186 ELLKDMIACGEKPD 227
           +LL+ MI     PD
Sbjct: 111 QLLRHMIEKQINPD 124


>ref|NP_176550.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana] gi|332195999|gb|AEE34120.1| pentatricopeptide
           (PPR) repeat-containing protein [Arabidopsis thaliana]
          Length = 257

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 41/75 (54%), Positives = 56/75 (74%)
 Frame = +3

Query: 3   GLKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVA 182
           G  PDVV++S LINGYCKAKR+D  +++F EM  +G   NT+TY TLI GFC+ G++  A
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204

Query: 183 KELLKDMIACGEKPD 227
           ++LL +MI+CG  PD
Sbjct: 205 QDLLNEMISCGVAPD 219



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           + PD+V++S LIN + K +++ +A +++KEM      P TITYN++IDGFCK   V  AK
Sbjct: 76  INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135

Query: 186 ELLKDMIACGEKPD 227
            +L  M + G  PD
Sbjct: 136 RMLDSMASKGCSPD 149



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 41/74 (55%)
 Frame = +3

Query: 6   LKPDVVSYSILINGYCKAKRMDKAVQVFKEMQLKGFKPNTITYNTLIDGFCKSGEVSVAK 185
           +K DVV  + +++  CK      A  +F EM  KG  PN +TYN +ID FC SG  S A 
Sbjct: 6   IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65

Query: 186 ELLKDMIACGEKPD 227
           +LL+ MI     PD
Sbjct: 66  QLLRHMIEKQINPD 79