BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016181
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256...   137   4e-30
ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-27
ref|XP_002522235.1| conserved hypothetical protein [Ricinus comm...   123   8e-26
ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|2...   116   7e-24
ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana] g...    94   5e-17

>ref|XP_002270114.1| PREDICTED: uncharacterized protein LOC100256599 [Vitis vinifera]
           gi|297740528|emb|CBI30710.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  137 bits (345), Expect = 4e-30
 Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 8/162 (4%)
 Frame = -3

Query: 625 ALFRRIQSSIAKDGSGGTKKRSFVNNKKMESAESVLDVLCQSRNQIRENKASPK------ 464
           ALFRRIQSSI+K  S GTKKR   ++    SAESVL++L QSR Q++   +  +      
Sbjct: 103 ALFRRIQSSISKGESLGTKKRISDSSVDKTSAESVLEILRQSRKQVKGRPSKKEGGQVLT 162

Query: 463 -RRGVPKTKGKTGDISPTSDFKLTRPPSSFVKKSPIPRPSTLKGQAIEVVNEDSL-ASSV 290
            RRGVPK      D    +D K  RPPS+FVK+SPIP P+  +G+A+++ NE S+  +S 
Sbjct: 163 QRRGVPKKDQGIPDKQYVADLKSARPPSNFVKRSPIPSPTNPRGKAVKLKNEVSVRTTSF 222

Query: 289 RKDPDSHKIEDMKLSELKELAKSRGMKGYSKLKKGELIALLK 164
            + P   K+E+MK++ELKELAKSRG+KGYSK+KK EL+ LL+
Sbjct: 223 NELP---KVEEMKVTELKELAKSRGIKGYSKMKKSELVELLR 261


>ref|XP_002316817.1| predicted protein [Populus trichocarpa] gi|222859882|gb|EEE97429.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  127 bits (319), Expect = 4e-27
 Identities = 91/235 (38%), Positives = 122/235 (51%), Gaps = 9/235 (3%)
 Frame = -3

Query: 841 LLNLTEITDGAPSFASQP--VHPTFWSIRCEGNXXXXXXXXXXXXXSHKPXXXXXXXXXX 668
           LLNL EI DG+ +FAS    +  +  SI+ +G+               +           
Sbjct: 30  LLNLPEIADGSLAFASHNGVLQFSVSSIKSDGSSKGRPPRKSSAPGRTEKEDEDSKSQSS 89

Query: 667 XXXXXXXXXXXXXIALFRRIQSSIAKDGSGGTKKRSFVNNKKMESAESVLDVLCQSRNQ- 491
                        +ALFRRIQSSI+K  S  TKK+    + +     S+L+VL  S    
Sbjct: 90  DRKQPMSSNQAEIMALFRRIQSSISKGESTATKKKKASRSNENSPTNSILEVLRHSTKHA 149

Query: 490 -----IRE-NKASPKRRGVPKTKGKTGDISPTSDFKLTRPPSSFVKKSPIPRPSTLKGQA 329
                +RE NK   ++R V K + KT       D KLTRPPS+F KKSPIP PST +   
Sbjct: 150 KGPSTVREGNKVLTQKRSVSKDQ-KTQAEHALEDVKLTRPPSNFTKKSPIPSPSTSRENT 208

Query: 328 IEVVNEDSLASSVRKDPDSHKIEDMKLSELKELAKSRGMKGYSKLKKGELIALLK 164
            E+ +E S   +     +  ++E MKL+ELKELAKSRG+KGYSKLKKGEL+ LL+
Sbjct: 209 TELNSEASEGKASNHKLELPRVEKMKLTELKELAKSRGIKGYSKLKKGELLELLR 263


>ref|XP_002522235.1| conserved hypothetical protein [Ricinus communis]
           gi|223538488|gb|EEF40093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 289

 Score =  123 bits (308), Expect = 8e-26
 Identities = 83/233 (35%), Positives = 123/233 (52%), Gaps = 7/233 (3%)
 Frame = -3

Query: 841 LLNLTEITDGAPSFASQP--VHPTFWSIRCEGNXXXXXXXXXXXXXSHKPXXXXXXXXXX 668
           LLNL EI DG  +F+ Q   +  +  + + +G+               K           
Sbjct: 56  LLNLAEIADGPSTFSWQKRVLQLSISNTKSDGSRRGRSPRKSSSPGKRKKEDKSEKYQFS 115

Query: 667 XXXXXXXXXXXXXIALFRRIQSSIAKDGSGGTKKRSFVNNKKMESAESVLDVLCQSRNQI 488
                        IALFRRI SSI+K  +  T++     ++     ES+L+ L QSR  +
Sbjct: 116 DGKLPRSPEKDEIIALFRRIHSSISKGEAKSTQQTDINFSEDKSPTESILEALRQSRKPV 175

Query: 487 R---ENKASPKRRGVPKTKGKTGDISP--TSDFKLTRPPSSFVKKSPIPRPSTLKGQAIE 323
           +   +++ S ++RGVPK   K  + +    + F  TRPPS F+++SPI  PS  +G   E
Sbjct: 176 KGREQDRVSMQKRGVPKEGPKLQNNAQHMAAKFNFTRPPSKFIRRSPISSPSFPRGSPTE 235

Query: 322 VVNEDSLASSVRKDPDSHKIEDMKLSELKELAKSRGMKGYSKLKKGELIALLK 164
           + N+ S ++   K  +  +IE+MKL ELKELAKSRG+KGYSKLKKGEL+ LL+
Sbjct: 236 LNNDPSASTESDKVLELPQIEEMKLPELKELAKSRGIKGYSKLKKGELLELLR 288


>ref|XP_002305062.1| predicted protein [Populus trichocarpa] gi|222848026|gb|EEE85573.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  116 bits (291), Expect = 7e-24
 Identities = 70/160 (43%), Positives = 101/160 (63%), Gaps = 6/160 (3%)
 Frame = -3

Query: 625 ALFRRIQSSIAKDGSGGTKKRSFVNNKKMESAESVLDVLCQSRNQIRENKASPKRRGVPK 446
           ALFRRIQ SI+K  S  T+K++   ++K  + +S+L+VL +SR Q ++     + + VP 
Sbjct: 67  ALFRRIQYSISKGESTATEKKNAGRSEKSPT-DSILEVLLRSRKQAKDTNTVTEGKNVPT 125

Query: 445 TKGKTGDI------SPTSDFKLTRPPSSFVKKSPIPRPSTLKGQAIEVVNEDSLASSVRK 284
            K     +      +  +DFKLTRP S+F KK  IP PST   +  E+ +E S A +   
Sbjct: 126 HKRSVPKVQKMQARNALADFKLTRPHSNFTKKFSIPSPSTPGEKNAELNSEASEAKASGS 185

Query: 283 DPDSHKIEDMKLSELKELAKSRGMKGYSKLKKGELIALLK 164
             +  ++E+MKL+ELKELAKSRG+KGYSKLKKGEL+  L+
Sbjct: 186 ISELPRVEEMKLTELKELAKSRGIKGYSKLKKGELLEFLR 225


>ref|NP_193609.2| Rho termination factor [Arabidopsis thaliana]
           gi|332658683|gb|AEE84083.1| Rho termination factor
           [Arabidopsis thaliana]
          Length = 245

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 62/159 (38%), Positives = 94/159 (59%), Gaps = 5/159 (3%)
 Frame = -3

Query: 625 ALFRRIQSSIAKDGSGGTK--KRSFVNNKKMESAESVLDVLCQSRNQIRENKASPKRRGV 452
           +L +RIQSSI+K  S G +  K S  ++K+    +++LDVL +SR               
Sbjct: 100 SLLKRIQSSISKGESRGVEEEKNSDESSKEKPLTKAILDVLEKSRK-------------- 145

Query: 451 PKTKGKTG--DISPTSDFKLTRPPSSFVKKSPIPRPSTLKGQAIEVVNED-SLASSVRKD 281
            KT+G T   +  P    +L RPPSSFVK++P+   ++     + V N D +L    +K+
Sbjct: 146 -KTEGDTSVKEKPPKRQVELPRPPSSFVKRTPLSSSASGPRGKLPVSNSDKALGKLTKKE 204

Query: 280 PDSHKIEDMKLSELKELAKSRGMKGYSKLKKGELIALLK 164
             +  IE MKL+ELKE+AK+RG+KGYSKL+K EL+ L++
Sbjct: 205 EKASLIETMKLAELKEVAKNRGIKGYSKLRKSELLELIR 243