BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016175
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528386.1| eukaryotic translation initiation factor 3 s...    57   1e-06
ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257...    57   2e-06
emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera]    57   2e-06
ref|XP_002325112.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002528386.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223532174|gb|EEF33979.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1888

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
 Frame = -2

Query: 423  PSSLNSMTVPPDAFLAPPNSSLESATLVNVEKDEKQNEAHVQENVCVDNSLTXXXXXXXX 244
            P+SLN++ V  + F A P SS+E+ T  +V+ D  +N+       C +NS T        
Sbjct: 1762 PASLNAIPVTQNGFPASPISSVETPTSTSVDLDS-ENKTEAVTGDCTENSST-------- 1812

Query: 243  XXXXXXXXHRKQEVDSEENKQSXXXXXXXXEQNSSNVEHDPN---PTSVSDDLAVVKETY 73
                        EV +E             E+ S   E  P    P +   D    K++ 
Sbjct: 1813 ------------EVGAENQPSEQKCQEQPDEKASPETEEKPTNIVPLTSDIDTPAAKDSC 1860

Query: 72   CTSRDNEKPTKCWGDYSDSEAEV 4
             +    EKP+KCW DYSD EAEV
Sbjct: 1861 NSIVVEEKPSKCWADYSDGEAEV 1883


>ref|XP_003633167.1| PREDICTED: uncharacterized protein LOC100257033 [Vitis vinifera]
          Length = 1897

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 49/153 (32%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
 Frame = -2

Query: 438  SPDVLPSSLNSMTVPPDAFLAPPNSSLESATLVNVE-----KDEKQNEAHVQENVCVDNS 274
            SP+  P S N + V  + F A P SS++S T+  VE     K E   E   Q+       
Sbjct: 1762 SPNGFPPSPNGVPVIQNEFPASPVSSVDSPTVDTVETGAESKSEVSEEGDAQKASTEVGD 1821

Query: 273  LTXXXXXXXXXXXXXXXXHRKQEVDSEENKQSXXXXXXXXEQNSSNVEHDPNPT-SVSDD 97
            +T                 + +E   +E  QS         Q    +E  P  T + SD+
Sbjct: 1822 MTN----------------QPREHSVQEEDQSGDNE-----QIGQEIEEKPVETVAASDN 1860

Query: 96   LAVVKETYCTSRD--NEKPTKCWGDYSDSEAEV 4
            +   KE  C +R+   EKP+KCWGDYSDSEAE+
Sbjct: 1861 VDAAKEN-CDNREVVKEKPSKCWGDYSDSEAEI 1892


>emb|CAN61544.1| hypothetical protein VITISV_008490 [Vitis vinifera]
          Length = 2171

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
 Frame = -2

Query: 438  SPDVLPSSLNSMTVPPDAFLAPPNSSLESATLVNVEKDEKQNEAHVQENVCVDNSLTXXX 259
            SP+  P S N + V  + F A P SS++S T+  VE    ++++ V E      + T   
Sbjct: 2036 SPNGFPPSPNGVPVIQNEFPASPVSSVDSPTVDTVETGA-ESKSEVSEEXBTQKASTEVG 2094

Query: 258  XXXXXXXXXXXXXHRKQEVDSEENKQSXXXXXXXXEQNSSNVEHDPNPTSVSDDLAVVKE 79
                          +  E + +E  QS         Q    +E  P  T  + D     +
Sbjct: 2095 DXTN----------QPXEHNVQEEDQSGDXE-----QIGQEIEEKPVETVAASDNVXAAK 2139

Query: 78   TYCTSRD--NEKPTKCWGDYSDSEAEV 4
              C +R+   EKP+KCWGDYSDSEAE+
Sbjct: 2140 ENCDNREVVKEKPSKCWGDYSDSEAEI 2166


>ref|XP_002325112.1| predicted protein [Populus trichocarpa] gi|222866546|gb|EEF03677.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/145 (27%), Positives = 60/145 (41%)
 Frame = -2

Query: 438 SPDVLPSSLNSMTVPPDAFLAPPNSSLESATLVNVEKDEKQNEAHVQENVCVDNSLTXXX 259
           SP+  P+SLN + V  + F A    S E+ T V+V+   +       EN   ++ +    
Sbjct: 516 SPNGYPASLNGIEVTQNGFPASLVGSEETPTSVSVDVGGENKSEAAAENGTENSEI---- 571

Query: 258 XXXXXXXXXXXXXHRKQEVDSEENKQSXXXXXXXXEQNSSNVEHDPNPTSVSDDLAVVKE 79
                            EV  E +           E  +  +   P   +V+ D  V KE
Sbjct: 572 -----------------EVGVENHSSDYENQKYQEENVNPEIGEKPAEVAVTSDTVVAKE 614

Query: 78  TYCTSRDNEKPTKCWGDYSDSEAEV 4
           T  +    EKP+KCW DYSD+EAE+
Sbjct: 615 TCDSLPTEEKPSKCWADYSDNEAEI 639