BLASTX nr result

ID: Coptis21_contig00016166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00016166
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37626.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259...    77   2e-12
ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_004161821.1| PREDICTED: uncharacterized protein LOC101230...    58   7e-07
ref|XP_002298719.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
 Frame = -1

Query: 456 FRRMWRTFFGRNVDASVKDTTS-PELCSA---------SADNXXXXXXXXXXXSRLVSLS 307
           F+++WR +F        K++   PE C           S +              +VS+S
Sbjct: 413 FKKIWRKWFSSKDGGFEKESNRIPEKCGTCDDSSEKIKSEEKCMDSKSQQADPIEMVSIS 472

Query: 306 NINKSVS--TEKDIMDSEGRN-KSSRRVGMFGRTVNWWRSGKSKANPDNTSEQGGEELNQ 136
           + N   S   +K    SE  + KS      F +  NW +  ++    D  S+Q  E LNQ
Sbjct: 473 SSNDDGSFLDKKSTRSSETYDDKSIASSNFFNKVANWCKFWRASPQSDVLSDQSWERLNQ 532

Query: 135 TNNKTDNSELFSKVSFWENMQLFLHTPKGAALISQSKTREQLAQ 4
            N+ ++  + FS+ S W +++ F+ TPKG+ L+SQS+TREQ+AQ
Sbjct: 533 INSHSEKHDCFSEDSLWSDIKSFMATPKGSVLVSQSRTREQMAQ 576


>ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259153 [Vitis vinifera]
          Length = 990

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
 Frame = -1

Query: 456 FRRMWRTFFGRNVDASVKDTTS-PELCSA---------SADNXXXXXXXXXXXSRLVSLS 307
           F+++WR +F        K++   PE C           S +              +VS+S
Sbjct: 436 FKKIWRKWFSSKDGGFEKESNRIPEKCGTCDDSSEKIKSEEKCMDSKSQQADPIEMVSIS 495

Query: 306 NINKSVS--TEKDIMDSEGRN-KSSRRVGMFGRTVNWWRSGKSKANPDNTSEQGGEELNQ 136
           + N   S   +K    SE  + KS      F +  NW +  ++    D  S+Q  E LNQ
Sbjct: 496 SSNDDGSFLDKKSTRSSETYDDKSIASSNFFNKVANWCKFWRASPQSDVLSDQSWERLNQ 555

Query: 135 TNNKTDNSELFSKVSFWENMQLFLHTPKGAALISQSKTREQLAQ 4
            N+ ++  + FS+ S W +++ F+ TPKG+ L+SQS+TREQ+AQ
Sbjct: 556 INSHSEKHDCFSEDSLWSDIKSFMATPKGSVLVSQSRTREQMAQ 599


>ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|222870188|gb|EEF07319.1|
           predicted protein [Populus trichocarpa]
          Length = 998

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
 Frame = -1

Query: 231 GMFGRTVNWWR-SGKSKANPDNTSEQGGEELNQTNNKTDNSELFSKVSFWENMQLFLHTP 55
           G+F R +NW +  G S    D +++Q  E   Q N+    +E+FS+ SFW  M+ F+ T 
Sbjct: 563 GLFKRILNWCKLQGNSS---DTSNDQPTEIPEQINSHAGKTEVFSEHSFWREMKSFIDTK 619

Query: 54  KGAALISQSKTREQLAQ 4
           KG+ LISQS+TREQ+A+
Sbjct: 620 KGSLLISQSRTREQIAR 636


>ref|XP_004161821.1| PREDICTED: uncharacterized protein LOC101230056, partial [Cucumis
           sativus]
          Length = 957

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 29/119 (24%)
 Frame = -1

Query: 273 IMDSEGRNKSSRRVGMFGRTVNWWRS-GKSKANPD----------------------NTS 163
           I+ S   +KSS   G+ G   NW++  GKS  N +                      ++S
Sbjct: 510 IVASAHDDKSSSNQGLLGSIRNWFKLWGKSTENREVSEHNCEQNQLKNQSGKHHLFSSSS 569

Query: 162 EQGGE------ELNQTNNKTDNSELFSKVSFWENMQLFLHTPKGAALISQSKTREQLAQ 4
            +  E      E NQ  N++    LFS  SFW++MQ F+ TP G  +IS+SKTR ++AQ
Sbjct: 570 TENNELIEHSCEQNQLKNQSGKHNLFSSSSFWQDMQSFMETPTGVEIISRSKTRSEIAQ 628


>ref|XP_002298719.1| predicted protein [Populus trichocarpa] gi|222845977|gb|EEE83524.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 44/151 (29%), Positives = 68/151 (45%)
 Frame = -1

Query: 456 FRRMWRTFFGRNVDASVKDTTSPELCSASADNXXXXXXXXXXXSRLVSLSNINKSVSTEK 277
           FR+ WR  FG  VD S       EL S +  +              V  +  NK+ ++ +
Sbjct: 434 FRKFWRRLFGGKVDDS-------ELKSENKKSVDSTSQGDDPVDPTVETTRENKTATSSE 486

Query: 276 DIMDSEGRNKSSRRVGMFGRTVNWWRSGKSKANPDNTSEQGGEELNQTNNKTDNSELFSK 97
               +E   KS    G+F + ++W + G   A   N  +Q         +     E+FS+
Sbjct: 487 P--HAEILRKSP---GLFNQILDWCKFGGDSAVASN--DQPTVIHGHMKSDAGKPEVFSE 539

Query: 96  VSFWENMQLFLHTPKGAALISQSKTREQLAQ 4
             FW  M+ F+   +G+ +ISQS+TREQLAQ
Sbjct: 540 DLFWREMESFIVMKRGSLVISQSRTREQLAQ 570


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